RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 C11orf49Q9H6J7 331 aa23.66■■□□□ 1.38
PABPC1-215ENST00000520804 ECHDC1Q9NTX5 307 aa23.66■■□□□ 1.38
PABPC1-215ENST00000520804 HOXC10Q9NYD6 342 aa23.66■■□□□ 1.38
PABPC1-215ENST00000520804 TRIOBPQ9H2D6 2365 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 CYP2D7A0A087X1C5 515 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 USP17L12C9JPN9 530 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 USP17L21D6R901 530 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 SMIM22K7EJ46 135 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 CCND3P30281 292 aaPredicted RBP23.65■■□□□ 1.38
PABPC1-215ENST00000520804 GRB14Q14449 540 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 KIAA1755Q5JYT7 1200 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 DDRGK1Q96HY6 314 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 CCDC17Q96LX7 622 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 TANGO6Q9C0B7 1094 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 PUS7LQ9H0K6 701 aaKnown RBP23.65■■□□□ 1.38
PABPC1-215ENST00000520804 ARHGEF10LQ9HCE6 1279 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 SLC4A4Q9Y6R1 1079 aa23.65■■□□□ 1.38
PABPC1-215ENST00000520804 CDK8P49336 464 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 ICA1Q05084 483 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 LHX8Q68G74 356 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 C16orf86Q6ZW13 317 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 LPAR1Q92633 364 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 FLRT1Q9NZU1 646 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 TMX2Q9Y320 296 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 IVNS1ABPQ9Y6Y0 642 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 RLFQ13129 1914 aa23.64■■□□□ 1.37
PABPC1-215ENST00000520804 A0A0G2JMZ2 1700 aa23.63■■□□□ 1.37
PABPC1-215ENST00000520804 HOXC6P09630 235 aa23.63■■□□□ 1.37
PABPC1-215ENST00000520804 CLEC10AQ8IUN9 316 aa23.63■■□□□ 1.37
PABPC1-215ENST00000520804 DCTPP1Q9H773 170 aa23.63■■□□□ 1.37
PABPC1-215ENST00000520804 SH2D4AQ9H788 454 aa23.63■■□□□ 1.37
PABPC1-215ENST00000520804 MFSD14CQ5VZR4 134 aa23.62■■□□□ 1.37
PABPC1-215ENST00000520804 CTR9Q6PD62 1173 aa23.62■■□□□ 1.37
PABPC1-215ENST00000520804 C7orf61Q8IZ16 206 aa23.62■■□□□ 1.37
PABPC1-215ENST00000520804 MOV10L1Q9BXT6 1211 aaKnown RBP23.62■■□□□ 1.37
PABPC1-215ENST00000520804 VCPKMTQ9H867 229 aa23.62■■□□□ 1.37
PABPC1-215ENST00000520804 DSG3P32926 999 aa23.61■■□□□ 1.37
PABPC1-215ENST00000520804 MB21D1Q8N884 522 aa23.61■■□□□ 1.37
PABPC1-215ENST00000520804 NPLOC4Q8TAT6 608 aa23.61■■□□□ 1.37
PABPC1-215ENST00000520804 SPATC1LQ9H0A9 340 aa23.61■■□□□ 1.37
PABPC1-215ENST00000520804 RANBP2P49792 3224 aaKnown RBP23.61■■□□□ 1.37
PABPC1-215ENST00000520804 PFASO15067 1338 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 A0A1W2PPC1 479 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 COL6A1P12109 1028 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 ATP2B2Q01814 1243 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 SPICE1Q8N0Z3 855 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 KBTBD3Q8NAB2 608 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 SHCBP1Q8NEM2 672 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 GPATCH3Q96I76 525 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 STRBPQ96SI9 672 aaKnown RBP23.6■■□□□ 1.37
PABPC1-215ENST00000520804 ARPP21Q9UBL0 812 aaPredicted RBP23.6■■□□□ 1.37
PABPC1-215ENST00000520804 STAP2Q9UGK3 403 aa23.6■■□□□ 1.37
PABPC1-215ENST00000520804 ZNF236Q9UL36 1845 aa23.59■■□□□ 1.37
PABPC1-215ENST00000520804 WDR46O15213 610 aaKnown RBP23.59■■□□□ 1.37
PABPC1-215ENST00000520804 STRNO43815 780 aa23.59■■□□□ 1.37
PABPC1-215ENST00000520804 FLOT1O75955 427 aa23.59■■□□□ 1.37
PABPC1-215ENST00000520804 FRMPD3Q5JV73 1810 aa23.59■■□□□ 1.37
PABPC1-215ENST00000520804 IGHA2P01877 340 aa23.58■■□□□ 1.37
PABPC1-215ENST00000520804 EEF2P13639 858 aaKnown RBP23.58■■□□□ 1.37
PABPC1-215ENST00000520804 ERCC3P19447 782 aa23.58■■□□□ 1.37
PABPC1-215ENST00000520804 DPP9Q86TI2 863 aa23.58■■□□□ 1.37
PABPC1-215ENST00000520804 ATG4CQ96DT6 458 aa23.58■■□□□ 1.37
PABPC1-215ENST00000520804 KANSL2Q9H9L4 492 aa23.58■■□□□ 1.37
PABPC1-215ENST00000520804 ZMYND8Q9ULU4 1186 aaPredicted RBP23.58■■□□□ 1.37
PABPC1-215ENST00000520804 PARP14Q460N5 1801 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 ADORA2AP29274 412 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 CYP2C19P33261 490 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 SBK1Q52WX2 424 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 APPBP2Q92624 585 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 MROH8Q9H579 483 aa23.57■■□□□ 1.36
PABPC1-215ENST00000520804 DDX20Q9UHI6 824 aaKnown RBP23.57■■□□□ 1.36
PABPC1-215ENST00000520804 GSG1L2A8MUP6 293 aa23.56■■□□□ 1.36
PABPC1-215ENST00000520804 PLS1Q14651 629 aa23.56■■□□□ 1.36
PABPC1-215ENST00000520804 GIMAP6Q6P9H5 292 aa23.56■■□□□ 1.36
PABPC1-215ENST00000520804 OSBP2Q969R2 916 aa23.56■■□□□ 1.36
PABPC1-215ENST00000520804 GDF15Q99988 308 aa23.56■■□□□ 1.36
PABPC1-215ENST00000520804 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.56■■□□□ 1.36
PABPC1-215ENST00000520804 SZT2Q5T011 3432 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 RNF113AO15541 343 aaKnown RBP23.55■■□□□ 1.36
PABPC1-215ENST00000520804 MSCO60682 206 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 CNGA1P29973 690 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 BMP8BP34820 402 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 OLFML2BQ68BL8 750 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 TRPV1Q8NER1 839 aa23.55■■□□□ 1.36
PABPC1-215ENST00000520804 ZFYP08048 801 aaPredicted RBP23.54■■□□□ 1.36
PABPC1-215ENST00000520804 SYN1P17600 705 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 TMEM132BQ14DG7 1078 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 NCAPG2Q86XI2 1143 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 ABRAQ8N0Z2 381 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 GOPCQ9HD26 462 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 ADAMTS5Q9UNA0 930 aa23.54■■□□□ 1.36
PABPC1-215ENST00000520804 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
PABPC1-215ENST00000520804 COBLO75128 1261 aa23.53■■□□□ 1.36
PABPC1-215ENST00000520804 CYBAP13498 195 aa23.53■■□□□ 1.36
PABPC1-215ENST00000520804 SAMD1Q6SPF0 538 aaPredicted RBP23.53■■□□□ 1.36
PABPC1-215ENST00000520804 FBXO28Q9NVF7 368 aa23.53■■□□□ 1.36
PABPC1-215ENST00000520804 PCDHB15Q9Y5E8 787 aa23.53■■□□□ 1.36
PABPC1-215ENST00000520804 ROBO3Q96MS0 1386 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms