RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
ERGIC1-208ENST00000520399 RIPOR2Q9Y4F9 1068 aa13.4□□□□□ -0.26
ERGIC1-208ENST00000520399 TNNC1P63316 161 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 CSRNP2Q9H175 543 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 TRAF5O00463 557 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 VWA3BQ502W6 1294 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 CYP26C1Q6V0L0 522 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 ADCY7P51828 1080 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 SEL1L2Q5TEA6 688 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 IGSF22Q8N9C0 903 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 KDM5CP41229 1560 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 BACH1O14867 736 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 CALCOCO2Q13137 446 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 CCDC122Q5T0U0 273 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 PPP1R21Q6ZMI0 780 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 KRT25Q7Z3Z0 450 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 KIFC2Q96AC6 838 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 MYOM2P54296 1465 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
ERGIC1-208ENST00000520399 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 E7EWF7 191 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 PAK1Q13153 545 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 PSMD2Q13200 908 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 PHLDB2Q86SQ0 1253 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 CTSWP56202 376 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 ITIH3Q06033 890 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 ARMC9Q7Z3E5 817 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 EXOC4Q96A65 974 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 FRMD3A2A2Y4 597 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 PSMD6Q15008 389 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 CHMP2AO43633 222 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 RNF34Q969K3 372 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
ERGIC1-208ENST00000520399 SLC8A3P57103 927 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 FANCCQ00597 558 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 RNF10Q8N5U6 811 aaKnown RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TMOD4Q9NZQ9 345 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 NBPF20Q3BBV1 942 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 MLKLQ8NB16 471 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TSC1Q92574 1164 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 STK32BQ9NY57 414 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 CHUKO15111 745 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TXKP42681 527 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 ZNF75DP51815 510 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 CDR2Q01850 454 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 BRD3Q15059 726 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 KRT40Q6A162 431 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 ARHGAP24Q8N264 748 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 VPS16Q9H269 839 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TTF2Q9UNY4 1162 aaKnown RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 ASIC2Q16515 512 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 DPP8Q6V1X1 898 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 IFT81Q8WYA0 676 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 PRDM1O75626 825 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 ZNF202O95125 648 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 KRT5P13647 590 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 SMTNP53814 917 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 SP4Q02446 784 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 CCDC25Q86WR0 208 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TM6SF1Q9BZW5 370 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 DONSONQ9NYP3 566 aa13.37□□□□□ -0.27
ERGIC1-208ENST00000520399 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 PHKG2P15735 406 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 TCIRG1Q13488 830 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 CHCHD3Q9NX63 227 aaKnown RBP13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 IMPACTQ9P2X3 320 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
ERGIC1-208ENST00000520399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms