RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 SBK1Q52WX2 424 aa18.74■□□□□ 0.59
CLK4-205ENST00000520199 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
CLK4-205ENST00000520199 FLRT1Q9NZU1 646 aa18.74■□□□□ 0.59
CLK4-205ENST00000520199 TMX2Q9Y320 296 aa18.74■□□□□ 0.59
CLK4-205ENST00000520199 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
CLK4-205ENST00000520199 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
CLK4-205ENST00000520199 GPAA1O43292 621 aa18.73■□□□□ 0.59
CLK4-205ENST00000520199 HMGCRP04035 888 aa18.73■□□□□ 0.59
CLK4-205ENST00000520199 XRCC5P13010 732 aaKnown RBP18.73■□□□□ 0.59
CLK4-205ENST00000520199 RASA1P20936 1047 aa18.73■□□□□ 0.59
CLK4-205ENST00000520199 DIS3LQ8TF46 1054 aaKnown RBP18.73■□□□□ 0.59
CLK4-205ENST00000520199 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLK4-205ENST00000520199 ROBO3Q96MS0 1386 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 PLXNA1Q9UIW2 1896 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
CLK4-205ENST00000520199 MAPK4P31152 587 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 ZSCAN25Q6NSZ9 544 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 PLEKHH3Q7Z736 793 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 SPICE1Q8N0Z3 855 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 NUDT12Q9BQG2 462 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
CLK4-205ENST00000520199 LAMA2P24043 3122 aaKnown RBP18.72■□□□□ 0.59
CLK4-205ENST00000520199 ICA1Q05084 483 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 CACNB2Q08289 660 aaPredicted RBP18.71■□□□□ 0.59
CLK4-205ENST00000520199 HDAC1Q13547 482 aaPredicted RBP18.71■□□□□ 0.59
CLK4-205ENST00000520199 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 NPLOC4Q8TAT6 608 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 NKX2-3Q8TAU0 364 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
CLK4-205ENST00000520199 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 VCPKMTQ9H867 229 aa18.71■□□□□ 0.59
CLK4-205ENST00000520199 FARP2O94887 1054 aaPredicted RBP18.7■□□□□ 0.58
CLK4-205ENST00000520199 MX1P20591 662 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 PTPREP23469 700 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 COG2Q14746 738 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 GIMAP6Q6P9H5 292 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 MOV10L1Q9BXT6 1211 aaKnown RBP18.7■□□□□ 0.58
CLK4-205ENST00000520199 FBXO28Q9NVF7 368 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 STAP2Q9UGK3 403 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 ADAMTS5Q9UNA0 930 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 RPTORQ8N122 1335 aa18.7■□□□□ 0.58
CLK4-205ENST00000520199 IGKV6D-41A0A0C4DH26 115 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 GLRX3O76003 335 aaKnown RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 PRKAR2AP13861 404 aaKnown RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 DSG3P32926 999 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 GRB14Q14449 540 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 HABP4Q5JVS0 413 aaKnown RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 LHX8Q68G74 356 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 SOCS4Q8WXH5 440 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 ATG4CQ96DT6 458 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 GPATCH3Q96I76 525 aa18.69■□□□□ 0.58
CLK4-205ENST00000520199 ARPP21Q9UBL0 812 aaPredicted RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
CLK4-205ENST00000520199 IGHDP01880 384 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
CLK4-205ENST00000520199 ZFYP08048 801 aaPredicted RBP18.68■□□□□ 0.58
CLK4-205ENST00000520199 ANKRD45Q5TZF3 282 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 CCDC129Q6ZRS4 1044 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 IFNL3Q8IZI9 196 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 PAWRQ96IZ0 340 aaKnown RBP18.68■□□□□ 0.58
CLK4-205ENST00000520199 PRO3102Q9H379 93 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 OGDHLQ9ULD0 1010 aa18.68■□□□□ 0.58
CLK4-205ENST00000520199 MINDY4BA8MYZ0 360 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 PATL2C9JE40 543 aaKnown RBP18.67■□□□□ 0.58
CLK4-205ENST00000520199 COBLO75128 1261 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 HOXC6P09630 235 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 PDE1AP54750 535 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 TRPV1Q8NER1 839 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 LPAR1Q92633 364 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 APBA2Q99767 749 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 SPATC1LQ9H0A9 340 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 KANSL2Q9H9L4 492 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 HMX1Q9NP08 348 aaPredicted RBP18.67■□□□□ 0.58
CLK4-205ENST00000520199 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 PCDH10Q9P2E7 1040 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 MCM3APO60318 1980 aa18.67■□□□□ 0.58
CLK4-205ENST00000520199 SLC15A5A6NIM6 579 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 PRDM1O75626 825 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 RGS2P41220 211 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 VPS53Q5VIR6 699 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
CLK4-205ENST00000520199 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 HOXC10Q9NYD6 342 aa18.66■□□□□ 0.58
CLK4-205ENST00000520199 ERCC3P19447 782 aa18.65■□□□□ 0.58
CLK4-205ENST00000520199 SMC5Q8IY18 1101 aa18.65■□□□□ 0.58
CLK4-205ENST00000520199 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
CLK4-205ENST00000520199 ERC2O15083 957 aa18.64■□□□□ 0.57
CLK4-205ENST00000520199 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
CLK4-205ENST00000520199 FLOT1O75955 427 aa18.64■□□□□ 0.57
CLK4-205ENST00000520199 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
CLK4-205ENST00000520199 CCNA1P78396 465 aa18.64■□□□□ 0.57
CLK4-205ENST00000520199 FAM83BQ5T0W9 1011 aa18.64■□□□□ 0.57
CLK4-205ENST00000520199 DPF3Q92784 378 aa18.64■□□□□ 0.57
CLK4-205ENST00000520199 FSD1Q9BTV5 496 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms