RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 NYAP2Q9P242 653 aa21.82■■□□□ 1.08
SREK1-207ENST00000520058 PTPN22Q9Y2R2 807 aa21.82■■□□□ 1.08
SREK1-207ENST00000520058 ZSWIM8A7E2V4 1837 aa21.82■■□□□ 1.08
SREK1-207ENST00000520058 DOCK3Q8IZD9 2030 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 A0A1W2PRG0 241 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 FOXP2O15409 715 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
SREK1-207ENST00000520058 NT5C2P49902 561 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 IMMTQ16891 758 aaKnown RBP21.81■■□□□ 1.08
SREK1-207ENST00000520058 MFSD6Q6ZSS7 791 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 GPRC5AQ8NFJ5 357 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 NEDD1Q8NHV4 660 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 HOXC10Q9NYD6 342 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 SYNPO2Q9UMS6 1093 aa21.81■■□□□ 1.08
SREK1-207ENST00000520058 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 CCDC85CA6NKD9 419 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 TNPO2O14787 897 aaKnown RBP21.8■■□□□ 1.08
SREK1-207ENST00000520058 WDR46O15213 610 aaKnown RBP21.8■■□□□ 1.08
SREK1-207ENST00000520058 TTLL1O95922 423 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 CHMLP26374 656 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 COG2Q14746 738 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 COA7Q96BR5 231 aa21.8■■□□□ 1.08
SREK1-207ENST00000520058 PARP14Q460N5 1801 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 ORC4O43929 436 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 CAPN15O75808 1086 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 CCNA1P78396 465 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 FAM47AQ5JRC9 791 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 RRP12Q5JTH9 1297 aaKnown RBP21.79■■□□□ 1.08
SREK1-207ENST00000520058 CASC1Q6TDU7 716 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 NBPF11Q86T75 865 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 CLEC10AQ8IUN9 316 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 CWC22Q9HCG8 908 aaKnown RBP21.79■■□□□ 1.08
SREK1-207ENST00000520058 MORF4L1Q9UBU8 362 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 CLIP2Q9UDT6 1046 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 HPS5Q9UPZ3 1129 aa21.79■■□□□ 1.08
SREK1-207ENST00000520058 ECM2O94769 699 aaPredicted RBP21.78■■□□□ 1.08
SREK1-207ENST00000520058 AKNAD1Q5T1N1 836 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 SIAH1Q8IUQ4 282 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 SPICE1Q8N0Z3 855 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 PAGR1Q9BTK6 254 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 ARHGAP39Q9C0H5 1083 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 MTMR4Q9NYA4 1195 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 SRRDQ9UH36 339 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.78■■□□□ 1.08
SREK1-207ENST00000520058 RABGAP1Q9Y3P9 1069 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
SREK1-207ENST00000520058 FLOT1O75955 427 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 FGRP09769 529 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 HAND2P61296 217 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 KIAA1211Q6ZU35 1233 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 RAET1EQ8TD07 263 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 MKL1Q969V6 931 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 TRIM47Q96LD4 638 aa21.77■■□□□ 1.08
SREK1-207ENST00000520058 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.77■■□□□ 1.08
SREK1-207ENST00000520058 IGKV6D-41A0A0C4DH26 115 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 LBX2Q6XYB7 198 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 MB21D1Q8N884 522 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 STAG1Q8WVM7 1258 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 ESR2Q92731 530 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 STX8Q9UNK0 236 aa21.76■■□□□ 1.07
SREK1-207ENST00000520058 COL11A1P12107 1806 aaPredicted RBP21.76■■□□□ 1.07
SREK1-207ENST00000520058 RLFQ13129 1914 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 F5H6K3 240 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 MAPK4P31152 587 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 ERVK-9P63128 1117 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 ERVK-24P63145 666 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 KLRC3Q07444 240 aa21.75■■□□□ 1.07
SREK1-207ENST00000520058 CCDC178Q5BJE1 867 aa21.74■■□□□ 1.07
SREK1-207ENST00000520058 CNNM2Q9H8M5 875 aa21.74■■□□□ 1.07
SREK1-207ENST00000520058 RBPJLQ9UBG7 517 aa21.74■■□□□ 1.07
SREK1-207ENST00000520058 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
SREK1-207ENST00000520058 SPDYE16A6NNV3 312 aaPredicted RBP21.73■■□□□ 1.07
SREK1-207ENST00000520058 SGSM2O43147 1006 aa21.73■■□□□ 1.07
SREK1-207ENST00000520058 IQCA1Q86XH1 822 aa21.73■■□□□ 1.07
SREK1-207ENST00000520058 GMCL1P1Q8NEA9 526 aa21.73■■□□□ 1.07
SREK1-207ENST00000520058 KRT23Q9C075 422 aa21.73■■□□□ 1.07
SREK1-207ENST00000520058 U3KPZ7 1027 aaPredicted RBP21.73■■□□□ 1.07
SREK1-207ENST00000520058 DSG3P32926 999 aa21.72■■□□□ 1.07
SREK1-207ENST00000520058 TRDNQ13061 729 aa21.72■■□□□ 1.07
SREK1-207ENST00000520058 SAMD1Q6SPF0 538 aaPredicted RBP21.72■■□□□ 1.07
SREK1-207ENST00000520058 INCENPQ9NQS7 918 aa21.72■■□□□ 1.07
SREK1-207ENST00000520058 TCP11L1Q9NUJ3 509 aa21.72■■□□□ 1.07
SREK1-207ENST00000520058 ISY1Q9ULR0 285 aaKnown RBP21.72■■□□□ 1.07
SREK1-207ENST00000520058 CTDP1Q9Y5B0 961 aaPredicted RBP21.72■■□□□ 1.07
SREK1-207ENST00000520058 NDUFB10O96000 172 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 CTGFP29279 349 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 PRKCZQ05513 592 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 KIAA1755Q5JYT7 1200 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 FAM83BQ5T0W9 1011 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 SLFN13Q68D06 897 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 TXNRD2Q9NNW7 524 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 IVNS1ABPQ9Y6Y0 642 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 A0A0G2JMZ2 1700 aa21.71■■□□□ 1.07
SREK1-207ENST00000520058 FLT3LGP49771 235 aa21.7■■□□□ 1.06
SREK1-207ENST00000520058 CAP1Q01518 475 aa21.7■■□□□ 1.06
SREK1-207ENST00000520058 WDR78Q5VTH9 848 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms