RNA–Protein interactions for RNA: ENST00000519760.1

CDK1-208, Transcript of cyclin dependent kinase 1, human

TSL 3

Gene CDK1, Length 276 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK1-208	ENST00000519760	EGR3	Q06889	387 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	CWF19L2	Q2TBE0	894 aa	Known RBP	5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	TMEM67	Q5HYA8	995 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	TMCO4	Q5TGY1	634 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	GK5	Q6ZS86	529 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	HS2ST1	Q7LGA3	356 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	LRRC3	Q9BY71	257 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	DUSP13	Q9UII6	198 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	KCNH3	Q9ULD8	1083 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	PCDHA11	Q9Y5I1	949 aa		5.24	□□□□□ -1.57
CDK1-208	ENST00000519760	RGS13	O14921	159 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	JAG1	P78504	1218 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	FZD5	Q13467	585 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	OVOS1	Q6IE37	1185 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	EAF1	Q96JC9	268 aa	Predicted RBP	5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	BACH2	Q9BYV9	841 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	TRIT1	Q9H3H1	467 aa	Known RBP	5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	C19orf44	Q9H6X5	657 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	SP110	Q9HB58	689 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	GPATCH2	Q9NW75	528 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	EBF1	Q9UH73	591 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	TMEM59L	Q9UK28	342 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	ROBO2	Q9HCK4	1378 aa		5.23	□□□□□ -1.57
CDK1-208	ENST00000519760	ATE1	O95260	518 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	MCM4	P33991	863 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	MFAP1	P55081	439 aa	Known RBP	5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	TIGD5	Q53EQ6	642 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	MPZL3	Q6UWV2	235 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	ABHD4	Q8TB40	342 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	ATG4C	Q96DT6	458 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	EHMT1	Q9H9B1	1298 aa		5.22	□□□□□ -1.57
CDK1-208	ENST00000519760	RBM47	A0AV96	593 aa	Known RBP	5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	ZBTB7C	A1YPR0	619 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	HPX	P02790	462 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	ZGLP1	P0C6A0	271 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	RAG1	P15918	1043 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	LTK	P29376	864 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	ITGAE	P38570	1179 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	APOBR	Q0VD83	1088 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	SNW1	Q13573	536 aa	Known RBP	5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	ZNF394	Q53GI3	561 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	TMC3	Q7Z5M5	1100 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	KSR1	Q8IVT5	923 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	NKD1	Q969G9	470 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	DIRC2	Q96SL1	478 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	ASPN	Q9BXN1	380 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	CNNM2	Q9H8M5	875 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	GMIP	Q9P107	970 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	MINPP1	Q9UNW1	487 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	PCDHGB7	Q9Y5F8	929 aa		5.21	□□□□□ -1.58
CDK1-208	ENST00000519760	BTBD11	A6QL63	1104 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	GALK1	P51570	392 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	TEK	Q02763	1124 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	CDCP2	Q5VXM1	449 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	USHBP1	Q8N6Y0	703 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	MYLIP	Q8WY64	445 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	NT5C1A	Q9BXI3	368 aa		5.2	□□□□□ -1.58
CDK1-208	ENST00000519760	FAM86C2P	A6NEL3	165 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	FANCC	Q00597	558 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	NMI	Q13287	307 aa	Predicted RBP	5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	MLEC	Q14165	292 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	CLEC16A	Q2KHT3	1053 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	NBPF9	Q3BBW0	867 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	NLRC3	Q7RTR2	1065 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	SLITRK4	Q8IW52	837 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	TMEM192	Q8IY95	271 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	FAM84A	Q96KN4	292 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	SPON2	Q9BUD6	331 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	RNF32	Q9H0A6	362 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	NSUN3	Q9H649	340 aa	Known RBP	5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	FAM53C	Q9NYF3	392 aa		5.19	□□□□□ -1.58
CDK1-208	ENST00000519760	EFEMP2	O95967	443 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	KRT1	P04264	644 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	RAC2	P15153	192 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	NME1	P15531	152 aa	Known RBP	5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	ZNF76	P36508	570 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	ZNF165	P49910	485 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	CHMP4BP1	P59074	171 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	RACK1	P63244	317 aa	Known RBP	5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	ZPBP2	Q6X784	338 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	CILP2	Q8IUL8	1156 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	KIAA0825	Q8IV33	1275 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	REXO1	Q8N1G1	1221 aa	Known RBP	5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	TCTN2	Q96GX1	697 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	CCDC120	Q96HB5	630 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	SLC9A7	Q96T83	725 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	HDAC8	Q9BY41	377 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	FOXP3	Q9BZS1	431 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	PRDM14	Q9GZV8	571 aa		5.18	□□□□□ -1.58
CDK1-208	ENST00000519760	KRTAP4-8	A0A0G2JLE6	195 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	DBX1	A6NMT0	343 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	ACR	P10323	421 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	USP48	Q86UV5	1035 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	PDZD8	Q8NEN9	1154 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	SLC38A3	Q99624	504 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	G6PC3	Q9BUM1	346 aa		5.17	□□□□□ -1.58
CDK1-208	ENST00000519760	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms