RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 TTC12Q9H892 705 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 MORC2Q9Y6X9 1032 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
HMGB4-203ENST00000519684 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 A0A087WWV3 80 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 RXRBP28702 533 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 RHBDL3P58872 404 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 DPCR1Q3MIW9 517 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 ZNF622Q969S3 477 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGB4-203ENST00000519684 LZTS2Q9BRK4 669 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 SH3GLB2Q9NR46 395 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 CLIP2Q9UDT6 1046 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 DAGLAQ9Y4D2 1042 aa9.65□□□□□ -0.86
HMGB4-203ENST00000519684 TNS1Q9HBL0 1735 aaKnown RBP9.65□□□□□ -0.86
HMGB4-203ENST00000519684 TTC38Q5R3I4 469 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 MSL1Q68DK7 614 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 KANK3Q6NY19 840 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 OLFM4Q6UX06 510 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 ELOA2Q8IYF1 753 aaPredicted RBP9.65□□□□□ -0.87
HMGB4-203ENST00000519684 FERMT2Q96AC1 680 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 SHISA4Q96DD7 197 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 MRFAP1L1Q96HT8 127 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 MTMR7Q9Y216 660 aa9.65□□□□□ -0.87
HMGB4-203ENST00000519684 SNED1Q8TER0 1413 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 F8W031 263 aaPredicted RBP9.64□□□□□ -0.87
HMGB4-203ENST00000519684 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 PNOCQ13519 176 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 LONRF3Q496Y0 759 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 NEDD1Q8NHV4 660 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 MAD2L2Q9UI95 211 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
HMGB4-203ENST00000519684 POLR2DO15514 142 aaKnown RBP9.64□□□□□ -0.87
HMGB4-203ENST00000519684 PTGS1P23219 599 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 PICALMQ13492 652 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 TNFRSF25Q93038 417 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 CSRNP2Q9H175 543 aa9.64□□□□□ -0.87
HMGB4-203ENST00000519684 MYH8P13535 1937 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 H0YIN7 160 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 TOP1P11387 765 aaKnown RBP9.63□□□□□ -0.87
HMGB4-203ENST00000519684 POSTNQ15063 836 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 ZNF174Q15697 407 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 EARS2Q5JPH6 523 aaKnown RBP9.63□□□□□ -0.87
HMGB4-203ENST00000519684 PIK3AP1Q6ZUJ8 805 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 CCDC186Q7Z3E2 898 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 METTL16Q86W50 562 aaKnown RBP9.63□□□□□ -0.87
HMGB4-203ENST00000519684 BLIDQ8IZY5 108 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 STAG2Q8N3U4 1231 aa9.63□□□□□ -0.87
HMGB4-203ENST00000519684 IKBKBO14920 756 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 PARP1P09874 1014 aaKnown RBP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 GRIN1Q05586 938 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 NPY5RQ15761 445 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 DNTTIP2Q5QJE6 756 aaKnown RBP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 ISM2Q6H9L7 571 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 GALNT17Q6IS24 598 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 STYK1Q6J9G0 422 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 HEATR3Q7Z4Q2 680 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 FAM177A1Q8N128 213 aaPredicted RBP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 GPKOWQ92917 476 aaPredicted RBP eCLIP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 TEKT1Q969V4 418 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 PCDHA4Q9UN74 947 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 CCDC194A0A1B0GVG4 234 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 PALM3A6NDB9 673 aaPredicted RBP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 KLRF2D3W0D1 207 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 CERS5Q8N5B7 392 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 CCDC12Q8WUD4 166 aaPredicted RBP9.62□□□□□ -0.87
HMGB4-203ENST00000519684 SMARCE1Q969G3 411 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 KCNF1Q9H3M0 494 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
HMGB4-203ENST00000519684 SMC2O95347 1197 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 SCNN1DP51172 638 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 ATP2C1P98194 919 aaPredicted RBP9.61□□□□□ -0.87
HMGB4-203ENST00000519684 MYL5Q02045 173 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PODNQ7Z5L7 613 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PDILTQ8N807 584 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 RRP36Q96EU6 259 aaKnown RBP9.61□□□□□ -0.87
HMGB4-203ENST00000519684 CEP95Q96GE4 821 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
HMGB4-203ENST00000519684 SPZ1Q9BXG8 430 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
HMGB4-203ENST00000519684 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PCDHA5Q9Y5H7 936 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PLIN4Q96Q06 1357 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 NEMFO60524 1076 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 MCM7P33993 719 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 PTGDRQ13258 359 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 WWC2Q6AWC2 1192 aa9.61□□□□□ -0.87
HMGB4-203ENST00000519684 DAGLBQ8NCG7 672 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms