RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RGS22Q8NE09 1264 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 NUP133Q8WUM0 1156 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 SCAND2PQ9GZW5 306 aaPredicted RBP16.81■□□□□ 0.28
CLN8-204ENST00000519254 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
CLN8-204ENST00000519254 GJB4Q9NTQ9 266 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 SCN4AP35499 1836 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 POTECB2RU33 542 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 IFNAR1P17181 557 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 RTN1Q16799 776 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 ABCB5Q2M3G0 1257 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 RCSD1Q6JBY9 416 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 FANCBQ8NB91 859 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
CLN8-204ENST00000519254 CCDC17Q96LX7 622 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLN8-204ENST00000519254 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 TCP11L1Q9NUJ3 509 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
CLN8-204ENST00000519254 PITPNM2Q9BZ72 1349 aa16.8■□□□□ 0.28
CLN8-204ENST00000519254 ADM5C9JUS6 153 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
CLN8-204ENST00000519254 DLK2Q6UY11 383 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 CATIPQ7Z7H3 387 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 SULF1Q8IWU6 871 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
CLN8-204ENST00000519254 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 FMNL1O95466 1100 aaPredicted RBP16.79■□□□□ 0.28
CLN8-204ENST00000519254 L1TD1Q5T7N2 865 aaKnown RBP16.79■□□□□ 0.28
CLN8-204ENST00000519254 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 ALG1Q9BT22 464 aa16.79■□□□□ 0.28
CLN8-204ENST00000519254 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
CLN8-204ENST00000519254 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 TBC1D12O60347 775 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 GH2P01242 217 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 JAG1P78504 1218 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 SSRP1Q08945 709 aaKnown RBP16.78■□□□□ 0.28
CLN8-204ENST00000519254 SEPT2Q15019 361 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 KRT26Q7Z3Y9 468 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 NBPF11Q86T75 865 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 PPP2R3BQ9Y5P8 575 aa16.78■□□□□ 0.28
CLN8-204ENST00000519254 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 TMEM179Q6ZVK1 233 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
CLN8-204ENST00000519254 PNMA1Q8ND90 353 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 RRAGCQ9HB90 399 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 CABP5Q9NP86 173 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 FZD1Q9UP38 647 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
CLN8-204ENST00000519254 GREB1LQ9C091 1923 aaPredicted RBP16.77■□□□□ 0.27
CLN8-204ENST00000519254 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.277e-9■■■■■ 47.1
CLN8-204ENST00000519254 TROAPQ12815 778 aa16.77■□□□□ 0.27
CLN8-204ENST00000519254 PPP2R5BQ15173 497 aa16.77■□□□□ 0.27
CLN8-204ENST00000519254 DCAF15Q66K64 600 aa16.77■□□□□ 0.27
CLN8-204ENST00000519254 ATL3Q6DD88 541 aa16.77■□□□□ 0.27
CLN8-204ENST00000519254 LRRC47Q8N1G4 583 aaKnown RBP16.77■□□□□ 0.27
CLN8-204ENST00000519254 DDAH1O94760 285 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 TTLL1O95922 423 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
CLN8-204ENST00000519254 PRKG1Q13976 671 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 KRT40Q6A162 431 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 CMTR1Q8N1G2 835 aaKnown RBP16.76■□□□□ 0.27
CLN8-204ENST00000519254 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
CLN8-204ENST00000519254 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
CLN8-204ENST00000519254 HOOK2Q96ED9 719 aa16.76■□□□□ 0.27
CLN8-204ENST00000519254 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.76■□□□□ 0.27
CLN8-204ENST00000519254 SYCE3A1L190 88 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 KIF28PB7ZC32 967 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
CLN8-204ENST00000519254 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 MRE11P49959 708 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 ICA1Q05084 483 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
CLN8-204ENST00000519254 USP28Q96RU2 1077 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 FTOQ9C0B1 505 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLN8-204ENST00000519254 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 ZBTB21Q9ULJ3 1066 aa16.75■□□□□ 0.27
CLN8-204ENST00000519254 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
CLN8-204ENST00000519254 CALM1P0DP23 149 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 CALM2P0DP24 149 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 CALM3P0DP25 149 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms