RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 CLIC6Q96NY7 704 aa11.51□□□□□ -0.57
SH2D4A-204ENST00000519207 UBAC1Q9BSL1 405 aa11.51□□□□□ -0.57
SH2D4A-204ENST00000519207 BSDC1Q9NW68 430 aaPredicted RBP11.51□□□□□ -0.57
SH2D4A-204ENST00000519207 JRKLQ9Y4A0 524 aa11.51□□□□□ -0.57
SH2D4A-204ENST00000519207 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CBFA2T2O43439 604 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 NRDCO43847 1150 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 TADA3O75528 432 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CPP00450 1065 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 ATP2B1P20020 1258 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 PTPREP23469 700 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 GUCY1A2P33402 732 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 MAGEA9P43362 315 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 TOB1P50616 345 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 MYL5Q02045 173 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 SEC23AQ15436 765 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 ARHGAP29Q52LW3 1261 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 TMCO3Q6UWJ1 677 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 STK11IPQ8N1F8 1099 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CNNM3Q8NE01 707 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 RNF26Q9BY78 433 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 ARGLU1Q9NWB6 273 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 UBE2Q2LH0YL09 131 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 FANCCQ00597 558 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 LONRF3Q496Y0 759 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 CAVIN4Q5BKX8 364 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 HSD3B7Q9H2F3 369 aa11.5□□□□□ -0.57
SH2D4A-204ENST00000519207 MYH2Q9UKX2 1941 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 PHLPP2Q6ZVD8 1323 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 SEMA3EO15041 775 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 FGRP09769 529 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 XBP1P17861 261 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 SFPQP23246 707 aaKnown RBP eCLIP11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 ACTN2P35609 894 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 PNOCQ13519 176 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 TMC6Q7Z403 805 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 ADGRA1Q86SQ6 560 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 PACS2Q86VP3 889 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 NLGN1Q8N2Q7 840 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 RIOK1Q9BRS2 568 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 RAI14Q9P0K7 980 aa11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 FBXO2Q9UK22 296 aaPredicted RBP11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 PDS5AQ29RF7 1337 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-204ENST00000519207 TPM1P09493 284 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 GYS1P13807 737 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 LMOD1P29536 600 aaPredicted RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 OAS2P29728 719 aaKnown RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 RFC4P35249 363 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 KANK3Q6NY19 840 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 ARMCX5Q6P1M9 558 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 PPP1R13BQ96KQ4 1090 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 ABCF2Q9UG63 623 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 PCDHA5Q9Y5H7 936 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 SRPRBQ9Y5M8 271 aaKnown RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 TNKSO95271 1327 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 EFCAB8A8MWE9 144 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 MINDY4BA8MYZ0 360 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 CALM1P0DP23 149 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 CALM2P0DP24 149 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 CALM3P0DP25 149 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 GYG1P46976 350 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 CC2D1AQ6P1N0 951 aaPredicted RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 GOLGA6L1Q8N7Z2 621 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 SDR42E1Q8WUS8 393 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 ZSCAN10Q96SZ4 725 aaPredicted RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 RBM28Q9NW13 759 aaKnown RBP11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 DUOX1Q9NRD9 1551 aa11.48□□□□□ -0.57
SH2D4A-204ENST00000519207 COL4A1P02462 1669 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 SCN7AQ01118 1682 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 UBASH3AP57075 661 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 SMC1AQ14683 1233 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 TRIML1Q8N9V2 468 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 DACH1Q9UI36 760 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms