RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 HSPD1P10809 573 aaKnown RBP8.97□□□□□ -0.97
SDCBP-206ENST00000519115 PSMA5P28066 241 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 HAND2P61296 217 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 CAP1Q01518 475 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 ICA1Q05084 483 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 NOM1Q5C9Z4 860 aaKnown RBP8.97□□□□□ -0.97
SDCBP-206ENST00000519115 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-206ENST00000519115 CD99L2Q8TCZ2 262 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 CCDC17Q96LX7 622 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 PARK7Q99497 189 aaKnown RBP8.97□□□□□ -0.97
SDCBP-206ENST00000519115 KIF2CQ99661 725 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 ANO2Q9NQ90 1003 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 INCENPQ9NQS7 918 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 A0A1W2PRG0 241 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 C19orf81C9J6K1 198 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 ST18O60284 1047 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 FGAP02671 866 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 SLC3A2P08195 630 aaKnown RBP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 SP3Q02447 781 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 PDE4BQ07343 736 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L2Q6R6M4 530 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 CTU1Q7Z7A3 348 aaKnown RBP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 FBXL16Q8N461 479 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 SMCR8Q8TEV9 937 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 ARHGAP39Q9C0H5 1083 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 KIAA1683Q9H0B3 1180 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 ASCC2Q9H1I8 757 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-206ENST00000519115 TACC3Q9Y6A5 838 aa8.96□□□□□ -0.98
SDCBP-206ENST00000519115 A0A0G2JMZ2 1700 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 RAD21O60216 631 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 PEX10O60683 326 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 PCP11498 1178 aaKnown RBP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 EEF2P13639 858 aaKnown RBP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 VCAM1P19320 739 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 FAM47AQ5JRC9 791 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 KIAA1755Q5JYT7 1200 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 C17orf99Q6UX52 265 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 SIAH1Q8IUQ4 282 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 TBC1D10CQ8IV04 446 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 ZNF444Q8N0Y2 327 aaPredicted RBP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 SPICE1Q8N0Z3 855 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 CHMP4CQ96CF2 233 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 ERO1AQ96HE7 468 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 MTA3Q9BTC8 594 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 MCOLN1Q9GZU1 580 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 NBPF3Q9H094 633 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 KANSL2Q9H9L4 492 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 ZNF287Q9HBT7 754 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 ARHGEF10LQ9HCE6 1279 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 TOMM22Q9NS69 142 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 DAXXQ9UER7 740 aaPredicted RBP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.95□□□□□ -0.98
SDCBP-206ENST00000519115 SLC45A1Q9Y2W3 748 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 TRIM17Q9Y577 477 aa8.95□□□□□ -0.98
SDCBP-206ENST00000519115 TSPY3P0CV98 308 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 TSPY8P0CW00 308 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 BCRP11274 1271 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 OSBPP22059 807 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 USP14P54578 494 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 LACTBP83111 547 aaPredicted RBP8.94□□□□□ -0.98
SDCBP-206ENST00000519115 PABPC4Q13310 644 aaKnown RBP eCLIP8.94□□□□□ -0.98
SDCBP-206ENST00000519115 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
SDCBP-206ENST00000519115 OTOP1Q7RTM1 612 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 ANKRD13CQ8N6S4 541 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 CEP95Q96GE4 821 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 C12orf42Q96LP6 360 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 RPAP3Q9H6T3 665 aaPredicted RBP8.94□□□□□ -0.98
SDCBP-206ENST00000519115 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 ANAPC4Q9UJX5 808 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 PLIN4Q96Q06 1357 aa8.94□□□□□ -0.98
SDCBP-206ENST00000519115 IGKV6D-41A0A0C4DH26 115 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 TSPY2A6NKD2 308 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 RANBP6O60518 1105 aaKnown RBP8.93□□□□□ -0.98
SDCBP-206ENST00000519115 NMT2O60551 498 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 CTGFP29279 349 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 HOXA7P31268 230 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-206ENST00000519115 HERVK_113P62684 666 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 TFAP4Q01664 338 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 PTH1RQ03431 593 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 KIF22Q14807 665 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 ANKRD1Q15327 319 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 LRRC47Q8N1G4 583 aaKnown RBP8.93□□□□□ -0.98
SDCBP-206ENST00000519115 ABHD8Q96I13 439 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 P2RX7Q99572 595 aaKnown RBP8.93□□□□□ -0.98
SDCBP-206ENST00000519115 PAGR1Q9BTK6 254 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 TANGO6Q9C0B7 1094 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 SH2D4AQ9H788 454 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 VCPKMTQ9H867 229 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 EFCC1Q9HA90 598 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 TMX2Q9Y320 296 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 NEDD4P46934 1319 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms