RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GCLCP48506 637 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-217ENST00000518538 RRP12Q5JTH9 1297 aaKnown RBP26.03■■□□□ 1.76
VEGFA-217ENST00000518538 KIAA1755Q5JYT7 1200 aa26.03■■□□□ 1.76
VEGFA-217ENST00000518538 CASC1Q6TDU7 716 aa26.03■■□□□ 1.76
VEGFA-217ENST00000518538 CD99L2Q8TCZ2 262 aa26.03■■□□□ 1.76
VEGFA-217ENST00000518538 RPAP3Q9H6T3 665 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-217ENST00000518538 GOPCQ9HD26 462 aa26.03■■□□□ 1.76
VEGFA-217ENST00000518538 SYNPO2Q9UMS6 1093 aa26.03■■□□□ 1.76
VEGFA-217ENST00000518538 U3KPZ7 1027 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-217ENST00000518538 TTLL1O95922 423 aa26.02■■□□□ 1.76
VEGFA-217ENST00000518538 LACTBP83111 547 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-217ENST00000518538 PPP4R3BQ5MIZ7 849 aa26.02■■□□□ 1.76
VEGFA-217ENST00000518538 CATSPERGQ6ZRH7 1159 aa26.02■■□□□ 1.76
VEGFA-217ENST00000518538 KIAA1211Q6ZU35 1233 aa26.02■■□□□ 1.76
VEGFA-217ENST00000518538 CLIP2Q9UDT6 1046 aa26.02■■□□□ 1.76
VEGFA-217ENST00000518538 NEDD4P46934 1319 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 NT5C2P49902 561 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 HERVK_113P62684 666 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 KIF22Q14807 665 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 TNS4Q8IZW8 715 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 MKL1Q969V6 931 aa26.01■■□□□ 1.75
VEGFA-217ENST00000518538 P2RX7Q99572 595 aaKnown RBP26.01■■□□□ 1.75
VEGFA-217ENST00000518538 WDR46O15213 610 aaKnown RBP26■■□□□ 1.75
VEGFA-217ENST00000518538 FAM110CQ1W6H9 321 aa26■■□□□ 1.75
VEGFA-217ENST00000518538 SPICE1Q8N0Z3 855 aa26■■□□□ 1.75
VEGFA-217ENST00000518538 ANKRD13CQ8N6S4 541 aa26■■□□□ 1.75
VEGFA-217ENST00000518538 GTF3C2Q8WUA4 911 aaPredicted RBP26■■□□□ 1.75
VEGFA-217ENST00000518538 MAP4K1Q92918 833 aa26■■□□□ 1.75
VEGFA-217ENST00000518538 IL17RBQ9NRM6 502 aa26■■□□□ 1.75
VEGFA-217ENST00000518538 ARHGEF6Q15052 776 aa25.99■■□□□ 1.75
VEGFA-217ENST00000518538 ESR2Q92731 530 aa25.99■■□□□ 1.75
VEGFA-217ENST00000518538 TCP11L1Q9NUJ3 509 aa25.99■■□□□ 1.75
VEGFA-217ENST00000518538 NMT2O60551 498 aa25.98■■□□□ 1.75
VEGFA-217ENST00000518538 CAP1Q01518 475 aa25.98■■□□□ 1.75
VEGFA-217ENST00000518538 PKN2Q16513 984 aaKnown RBP25.98■■□□□ 1.75
VEGFA-217ENST00000518538 TANGO6Q9C0B7 1094 aa25.98■■□□□ 1.75
VEGFA-217ENST00000518538 MCOLN1Q9GZU1 580 aa25.98■■□□□ 1.75
VEGFA-217ENST00000518538 LSG1Q9H089 658 aaKnown RBP25.98■■□□□ 1.75
VEGFA-217ENST00000518538 TRIM17Q9Y577 477 aa25.98■■□□□ 1.75
VEGFA-217ENST00000518538 F5H6K3 240 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 RAD21O60216 631 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 NOVP48745 357 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 KLRC3Q07444 240 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 OTOP1Q7RTM1 612 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 LRRC47Q8N1G4 583 aaKnown RBP25.97■■□□□ 1.75
VEGFA-217ENST00000518538 GMCL1P1Q8NEA9 526 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 EFCC1Q9HA90 598 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 MORF4L1Q9UBU8 362 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 STX8Q9UNK0 236 aa25.97■■□□□ 1.75
VEGFA-217ENST00000518538 RBM8AQ9Y5S9 174 aaKnown RBP25.97■■□□□ 1.75
VEGFA-217ENST00000518538 MYH4Q9Y623 1939 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 CYP21A2P08686 494 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 LBX2Q6XYB7 198 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 KRT23Q9C075 422 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 ARHGAP39Q9C0H5 1083 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 CNNM2Q9H8M5 875 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 ANO2Q9NQ90 1003 aa25.96■■□□□ 1.75
VEGFA-217ENST00000518538 NDUFB10O96000 172 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 GNRH1P01148 92 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 PSMC4P43686 418 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 COG2Q14746 738 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 NKX2-3Q8TAU0 364 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 HOXC10Q9NYD6 342 aa25.95■■□□□ 1.74
VEGFA-217ENST00000518538 SPDYE16A6NNV3 312 aaPredicted RBP25.94■■□□□ 1.74
VEGFA-217ENST00000518538 B4E1Z4 1266 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 KDM4AO75164 1064 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 CTGFP29279 349 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 FCGRTP55899 365 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 FAM83BQ5T0W9 1011 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 POTEEQ6S8J3 1075 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 TXNRD2Q9NNW7 524 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 RBPJLQ9UBG7 517 aa25.94■■□□□ 1.74
VEGFA-217ENST00000518538 MYPNQ86TC9 1320 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 FLOT1O75955 427 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 GPRC5AQ8NFJ5 357 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 TRIM47Q96LD4 638 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 RABGAP1Q9Y3P9 1069 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 ZSWIM8A7E2V4 1837 aa25.93■■□□□ 1.74
VEGFA-217ENST00000518538 FMNL1O95466 1100 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-217ENST00000518538 DSG3P32926 999 aa25.92■■□□□ 1.74
VEGFA-217ENST00000518538 FBXO46Q6PJ61 603 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-217ENST00000518538 IQCA1Q86XH1 822 aa25.92■■□□□ 1.74
VEGFA-217ENST00000518538 TTC14Q96N46 770 aa25.92■■□□□ 1.74
VEGFA-217ENST00000518538 NUP88Q99567 741 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-217ENST00000518538 PAGR1Q9BTK6 254 aa25.92■■□□□ 1.74
VEGFA-217ENST00000518538 ECM2O94769 699 aaPredicted RBP25.91■■□□□ 1.74
VEGFA-217ENST00000518538 ERVK-9P63128 1117 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 ERVK-24P63145 666 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 TRDNQ13061 729 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 CCDC178Q5BJE1 867 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 SLFN13Q68D06 897 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 ZSWIM5Q9P217 1185 aa25.91■■□□□ 1.74
VEGFA-217ENST00000518538 RLFQ13129 1914 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 PEX10O60683 326 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 CNMDO75829 334 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 TOP1P11387 765 aaKnown RBP25.9■■□□□ 1.74
VEGFA-217ENST00000518538 HOXD10P28358 340 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 GMCL1Q96IK5 515 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 PTPN22Q9Y2R2 807 aa25.9■■□□□ 1.74
VEGFA-217ENST00000518538 E7EWF7 191 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms