RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 USP6NLQ92738 828 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 RPAP3Q9H6T3 665 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 ARHGEF10LQ9HCE6 1279 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 ZMYM6O95789 1325 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 MAPK4P31152 587 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 TDO2P48775 406 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 MCMDC2Q4G0Z9 681 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 CCDC129Q6ZRS4 1044 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 RAET1EQ8TD07 263 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 MKL1Q969V6 931 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 COA7Q96BR5 231 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
IGHV3-25-201ENST00000518224 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 PEX10O60683 326 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 PDE4AP27815 886 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 NOVP48745 357 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 PPARAQ07869 468 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 COG2Q14746 738 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 MORN1Q5T089 497 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 NEDD1Q8NHV4 660 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 NAPBQ9H115 298 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 PORCNQ9H237 461 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 HOXC10Q9NYD6 342 aa13.51□□□□□ -0.25
IGHV3-25-201ENST00000518224 ADCY3O60266 1144 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 IGHA2P01877 340 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 APPP05067 770 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 SDSP20132 328 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 SOCS4Q8WXH5 440 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 MKNK2Q9HBH9 465 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
IGHV3-25-201ENST00000518224 CCDC171Q6TFL3 1326 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 ORC4O43929 436 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 FGAP02671 866 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 CAPN2P17655 700 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 DSG3P32926 999 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 CCNA1P78396 465 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 PDE4BQ07343 736 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 MTFR1Q15390 333 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 SHCBP1Q8NEM2 672 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
IGHV3-25-201ENST00000518224 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 GJB1P08034 283 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 HOXC6P09630 235 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 ELNP15502 786 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 EN2P19622 333 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 UBE2Q1Q7Z7E8 422 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 CEP95Q96GE4 821 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 PAK6Q9NQU5 681 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-25-201ENST00000518224 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 HIP1O00291 1037 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 PRDM1O75626 825 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 INHAP05111 366 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 CCL5P13501 91 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 GSPT1P15170 499 aaKnown RBP13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 GJA8P48165 433 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 UBXN2AP68543 259 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 GRB14Q14449 540 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 TTC22Q5TAA0 569 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 PLEKHH3Q7Z736 793 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 GMCL1P1Q8NEA9 526 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 REPS2Q8NFH8 660 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 NUDT12Q9BQG2 462 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
IGHV3-25-201ENST00000518224 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 F5H6K3 240 aa13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 TTLL1O95922 423 aa13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 NDUFB10O96000 172 aa13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 HMGCRP04035 888 aa13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
IGHV3-25-201ENST00000518224 PTPREP23469 700 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms