RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 POLR3KQ9Y2Y1 108 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-203ENST00000518151 NFIBO00712 420 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 GBP1P32455 592 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 TAGLNQ01995 201 aaKnown RBP7.71□□□□□ -1.18
CSMD1-203ENST00000518151 ZNF326Q5BKZ1 582 aaKnown RBP7.71□□□□□ -1.18
CSMD1-203ENST00000518151 ERMP1Q7Z2K6 904 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 LILRA2Q8N149 483 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 DIRC2Q96SL1 478 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 DCP1AQ9NPI6 582 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-203ENST00000518151 KBTBD4Q9NVX7 518 aa7.71□□□□□ -1.18
CSMD1-203ENST00000518151 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
CSMD1-203ENST00000518151 FITM1A5D6W6 292 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 WASH4PA8MWX3 477 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 CHURC1-FNTBB4DL54 471 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 RNF4P78317 190 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 CLEC16AQ2KHT3 1053 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 ZSCAN18Q8TBC5 510 aaPredicted RBP7.7□□□□□ -1.18
CSMD1-203ENST00000518151 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
CSMD1-203ENST00000518151 LRRC3Q9BY71 257 aa7.7□□□□□ -1.18
CSMD1-203ENST00000518151 RBM47A0AV96 593 aaKnown RBP7.69□□□□□ -1.18
CSMD1-203ENST00000518151 DUSP4Q13115 394 aa7.69□□□□□ -1.18
CSMD1-203ENST00000518151 SPPL2CQ8IUH8 684 aa7.69□□□□□ -1.18
CSMD1-203ENST00000518151 ENOX1Q8TC92 643 aaKnown RBP7.69□□□□□ -1.18
CSMD1-203ENST00000518151 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
CSMD1-203ENST00000518151 KCNQ5Q9NR82 932 aa7.69□□□□□ -1.18
CSMD1-203ENST00000518151 PCDHA11Q9Y5I1 949 aa7.69□□□□□ -1.18
CSMD1-203ENST00000518151 RGS13O14921 159 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 LRRN2O75325 713 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 ZGLP1P0C6A0 271 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 TMEM253P0C7T8 217 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 GARTP22102 1010 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
CSMD1-203ENST00000518151 ERVFC1P60507 584 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 CHRNEQ04844 493 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 NR0B2Q15466 257 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 HS2ST1Q7LGA3 356 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 KIF2CQ99661 725 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSMD1-203ENST00000518151 GMIPQ9P107 970 aa7.68□□□□□ -1.18
CSMD1-203ENST00000518151 TLR3O15455 904 aaKnown RBP7.67□□□□□ -1.18
CSMD1-203ENST00000518151 RAG1P15918 1043 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 RAD51AP2Q09MP3 1159 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 FBXL19Q6PCT2 694 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 FBXO27Q8NI29 283 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 SLC6A17Q9H1V8 727 aa7.67□□□□□ -1.18
CSMD1-203ENST00000518151 CWC22Q9HCG8 908 aaKnown RBP7.67□□□□□ -1.18
CSMD1-203ENST00000518151 ATE1O95260 518 aa7.66□□□□□ -1.18
CSMD1-203ENST00000518151 GGT7Q9UJ14 662 aa7.66□□□□□ -1.18
CSMD1-203ENST00000518151 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
CSMD1-203ENST00000518151 SLC22A31A6NKX4 558 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 GREM1O60565 184 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 DNAJA2O60884 412 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 NMIQ13287 307 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-203ENST00000518151 SNX17Q15036 470 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 FBLN7Q53RD9 439 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 ARSHQ5FYA8 562 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 SPOCD1Q6ZMY3 1216 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 RNF111Q6ZNA4 994 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 IRF2BP1Q8IU81 584 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 LRRC56Q8IYG6 542 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-203ENST00000518151 ANKS4BQ8N8V4 417 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 SYTL5Q8TDW5 730 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-203ENST00000518151 GIPC2Q8TF65 315 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 RNF32Q9H0A6 362 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 COPRSQ9NQ92 184 aa7.65□□□□□ -1.18
CSMD1-203ENST00000518151 RBAK-RBAKDNI3L0D1 243 aa7.64□□□□□ -1.19
CSMD1-203ENST00000518151 C1QTNF9P0C862 333 aa7.64□□□□□ -1.19
CSMD1-203ENST00000518151 TEKQ02763 1124 aa7.64□□□□□ -1.19
CSMD1-203ENST00000518151 ZNF296Q8WUU4 475 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-203ENST00000518151 VWCEQ96DN2 955 aa7.64□□□□□ -1.19
CSMD1-203ENST00000518151 SHISA3A0PJX4 238 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 TCAF2A6NFQ2 919 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 MED14OSP0DP75 135 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 GLDCP23378 1020 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 TRHRP34981 398 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-203ENST00000518151 CCNFP41002 786 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
CSMD1-203ENST00000518151 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 CILP2Q8IUL8 1156 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 REXO1Q8N1G1 1221 aaKnown RBP7.63□□□□□ -1.19
CSMD1-203ENST00000518151 DAGLBQ8NCG7 672 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 C19orf44Q9H6X5 657 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 EHMT1Q9H9B1 1298 aa7.63□□□□□ -1.19
CSMD1-203ENST00000518151 SSU72P8A0A1W2PR75 194 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 UBOX5O94941 541 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 CFPP27918 469 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 APOBRQ0VD83 1088 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 LRRFIP1Q32MZ4 808 aaKnown RBP7.62□□□□□ -1.19
CSMD1-203ENST00000518151 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 SIAH1Q8IUQ4 282 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 ZNF655Q8N720 491 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-203ENST00000518151 KCNN1Q92952 543 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 SP110Q9HB58 689 aa7.62□□□□□ -1.19
CSMD1-203ENST00000518151 YBX2Q9Y2T7 364 aaKnown RBP7.62□□□□□ -1.19
CSMD1-203ENST00000518151 KRT1P04264 644 aa7.61□□□□□ -1.19
CSMD1-203ENST00000518151 ZNF165P49910 485 aa7.61□□□□□ -1.19
CSMD1-203ENST00000518151 PCBP3P57721 371 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms