RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 BIN2Q9UBW5 565 aaPredicted RBP4.76□□□□□ -1.65
CPNE3-204ENST00000517862 FRYQ5TBA9 3013 aa4.76□□□□□ -1.65
CPNE3-204ENST00000517862 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
CPNE3-204ENST00000517862 ADGRF5Q8IZF2 1346 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 MYH14Q7Z406 1995 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 CNOT1A5YKK6 2376 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 SOWAHDA6NJG2 315 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 UBE2Q2LH0YL09 131 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 PSPNO60542 156 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 PRMT3O60678 531 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 ZNF865P0CJ78 1059 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 GMPSP49915 693 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 FKBP1BP68106 108 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 CLDN10P78369 228 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 CTBSQ01459 385 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 PTK2Q05397 1052 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 CRHR2Q13324 411 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 LBRQ14739 615 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 NFIXQ14938 502 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 WDR44Q5JSH3 913 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 INTS6LQ5JSJ4 861 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 NBPF10Q6P3W6 841 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 PDXDC2PQ6P474 469 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 ANKMY2Q8IV38 441 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 RTKN2Q8IZC4 609 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 ADSSL1Q8N142 457 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 ZBTB38Q8NAP3 1195 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 KCNH5Q8NCM2 988 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 DCPSQ96C86 337 aaKnown RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 KIAA1024Q9UPX6 916 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 KIF24Q5T7B8 1368 aa4.75□□□□□ -1.65
CPNE3-204ENST00000517862 COL5A3P25940 1745 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-204ENST00000517862 FAM208AQ9UK61 1670 aaKnown RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ANKRD50Q9ULJ7 1429 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 PIEZO2Q9H5I5 2752 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 MYO9AB2RTY4 2548 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 HECTD1Q9ULT8 2610 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 SHTN1A0MZ66 631 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 DBX1A6NMT0 343 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 PROB1E7EW31 1015 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 THBS1P07996 1170 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ARID4AP29374 1257 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ZNF211Q13398 564 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 COL9A3Q14050 684 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 SHHQ15465 462 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 STYK1Q6J9G0 422 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 OLFM4Q6UX06 510 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 MOB2Q70IA6 237 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 OGFOD1Q8N543 542 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 DIS3LQ8TF46 1054 aaKnown RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 C7orf43Q8WVR3 580 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 PIGBQ92521 554 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 CLP1Q92989 425 aaKnown RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 MRRFQ96E11 262 aaKnown RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 CDCA5Q96FF9 252 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ABHD17AQ96GS6 310 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ZNF576Q9H609 170 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 KIAA1522Q9P206 1035 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 JAG2Q9Y219 1238 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
CPNE3-204ENST00000517862 COL1A1P02452 1464 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-204ENST00000517862 VPS13AQ96RL7 3174 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 RBM47A0AV96 593 aaKnown RBP4.73□□□□□ -1.65
CPNE3-204ENST00000517862 KIAA1324LA8MWY0 1029 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-204ENST00000517862 ATP5J2-PTCD1G3V325 749 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 ABL1P00519 1130 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 CAPN2P17655 700 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 GRK4P32298 578 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 INHBEP58166 350 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 RAB15P59190 212 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 UBXN2AP68543 259 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 EML3Q32P44 896 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 OXLD1Q5BKU9 147 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 LILRA6Q6PI73 481 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 MICALL1Q8N3F8 863 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 PHTF2Q8N3S3 785 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 KDF1Q8NAX2 398 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-204ENST00000517862 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.73□□□□□ -1.65
CPNE3-204ENST00000517862 ADAM32Q8TC27 787 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 PRIMPOLQ96LW4 560 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 BRIP1Q9BX63 1249 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 BCL2L13Q9BXK5 485 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 GPAMQ9HCL2 828 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 C2CD3Q4AC94 2353 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 SCN7AQ01118 1682 aa4.73□□□□□ -1.65
CPNE3-204ENST00000517862 EP300Q09472 2414 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-204ENST00000517862 PIK3C2GO75747 1445 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 DAPK1P53355 1430 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 ZSWIM8A7E2V4 1837 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 TRIOO75962 3097 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 CFAP46Q8IYW2 2715 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 H7C1D1 291 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 MEN1O00255 615 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 IGF2BP3O00425 579 aaKnown RBP eCLIP4.72□□□□□ -1.65
CPNE3-204ENST00000517862 ERC2O15083 957 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 DCXO43602 365 aa4.72□□□□□ -1.65
CPNE3-204ENST00000517862 ZNF16P17020 682 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms