RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 TNMDQ9H2S6 317 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-203ENST00000517693 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 PKN1Q16512 942 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 POTEDQ86YR6 584 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 ZSCAN29Q8IWY8 852 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 CLSTN2Q9H4D0 955 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 ZNF277Q9NRM2 450 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 DACT1Q9NYF0 836 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 LTBP3Q9NS15 1303 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 PSMD14O00487 310 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 MYO1BO43795 1136 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 TNIP1Q15025 636 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 FKBP1CQ5VVH2 108 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 GJB4Q9NTQ9 266 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
SPIDR-203ENST00000517693 MAD2L2Q9UI95 211 aa13.57□□□□□ -0.24
SPIDR-203ENST00000517693 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPIDR-203ENST00000517693 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 NFIAQ12857 509 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 HERC5Q9UII4 1024 aaKnown RBP13.56□□□□□ -0.24
SPIDR-203ENST00000517693 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
SPIDR-203ENST00000517693 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 BTBD18B2RXH4 712 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 CAVIN2O95810 425 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 LIG1P18858 919 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 RPS12P25398 132 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 SHMT1P34896 483 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 NLRP5P59047 1200 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 GMLQ99445 158 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 FAM198AQ9UFP1 575 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 MPHOSPH10O00566 681 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 CUTAO60888 179 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 RAD17O75943 681 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 AKR1B1P15121 316 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 FTOQ9C0B1 505 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPIDR-203ENST00000517693 KANSL2Q9H9L4 492 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
SPIDR-203ENST00000517693 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-203ENST00000517693 NR1I2O75469 434 aa13.54□□□□□ -0.24
SPIDR-203ENST00000517693 CMA1P23946 247 aa13.54□□□□□ -0.24
SPIDR-203ENST00000517693 TCP10Q12799 353 aa13.54□□□□□ -0.24
SPIDR-203ENST00000517693 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
SPIDR-203ENST00000517693 RBM43Q6ZSC3 357 aaKnown RBP13.54□□□□□ -0.24
SPIDR-203ENST00000517693 TDRD3Q9H7E2 651 aaKnown RBP13.54□□□□□ -0.24
SPIDR-203ENST00000517693 PPP1R1BQ9UD71 204 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-203ENST00000517693 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
SPIDR-203ENST00000517693 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 PDHBP11177 359 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 GNA11P29992 359 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 TNNI2P48788 182 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 CCDC173Q0VFZ6 552 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 PTPAQ15257 358 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 FAM83AQ86UY5 434 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 FAM151AQ8WW52 585 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
SPIDR-203ENST00000517693 PCDHA4Q9UN74 947 aa13.53□□□□□ -0.24
SPIDR-203ENST00000517693 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms