RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.82□□□□□ -1
SCARNA1-201ENST00000517138 MEIS3P2A8K0S8 358 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 PAPLNO95428 1278 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 ACRP10323 421 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 ITGB5P18084 799 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 CCDC81Q6ZN84 652 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 THAP5Q7Z6K1 395 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 TMEM192Q8IY95 271 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 SLC9A7Q96T83 725 aa8.81□□□□□ -1
SCARNA1-201ENST00000517138 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
SCARNA1-201ENST00000517138 SNW1Q13573 536 aaKnown RBP8.8□□□□□ -1
SCARNA1-201ENST00000517138 GAB4Q2WGN9 574 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 RUFY4Q6ZNE9 571 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 GPR62Q9BZJ7 368 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 ACBD3Q9H3P7 528 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 PODXL2Q9NZ53 605 aa8.8□□□□□ -1
SCARNA1-201ENST00000517138 NBPF12Q5TAG4 269 aaPredicted RBP8.79□□□□□ -1
SCARNA1-201ENST00000517138 CREG2Q8IUH2 290 aa8.79□□□□□ -1
SCARNA1-201ENST00000517138 ASPNQ9BXN1 380 aa8.79□□□□□ -1
SCARNA1-201ENST00000517138 LMCD1Q9NZU5 365 aa8.79□□□□□ -1
SCARNA1-201ENST00000517138 TNFRSF10CO14798 259 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 RALGPS1Q5JS13 557 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 FBXW10Q5XX13 1052 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 FERD3LQ96RJ6 166 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 EFR3BQ9Y2G0 817 aa8.78□□□□□ -1
SCARNA1-201ENST00000517138 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 TMC3Q7Z5M5 1100 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 TSPYL5Q86VY4 417 aaPredicted RBP8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 SLC6A18Q96N87 628 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 MINPP1Q9UNW1 487 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 CTNND2Q9UQB3 1225 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 CARMIL2Q6F5E8 1435 aa8.77□□□□□ -1.01
SCARNA1-201ENST00000517138 RBM25P49756 843 aaKnown RBP8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 ZYXQ15942 572 aaKnown RBP8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 GPRASP2Q96D09 838 aa8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 SLAMF8Q9P0V8 285 aa8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 DUSP13Q9UII6 198 aa8.76□□□□□ -1.01
SCARNA1-201ENST00000517138 CLEC3AO75596 197 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 GJA8P48165 433 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 NBPF9Q3BBW0 867 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 FYB2Q5VWT5 728 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 TMPRSS7Q7RTY8 843 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 LSRQ86X29 649 aaPredicted RBP8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 TRIT1Q9H3H1 467 aaKnown RBP8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 GPATCH2Q9NW75 528 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 PCDHA11Q9Y5I1 949 aa8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
SCARNA1-201ENST00000517138 C9IYK1 514 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 SOX9P48436 509 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 EGR3Q06889 387 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 ATG4DQ86TL0 474 aaPredicted RBP8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 ALPK1Q96QP1 1244 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 ADAMTS10Q9H324 1103 aa8.74□□□□□ -1.01
SCARNA1-201ENST00000517138 ERVFC1P60507 584 aa8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 NMIQ13287 307 aaPredicted RBP8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 FLAD1Q8NFF5 587 aa8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 HDAC8Q9BY41 377 aa8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 PRDM14Q9GZV8 571 aa8.73□□□□□ -1.01
SCARNA1-201ENST00000517138 JUNBP17275 347 aaPredicted RBP8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 NASPP49321 788 aaPredicted RBP8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 RNF4P78317 190 aa8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 RBBP8NLQ8NC74 664 aaPredicted RBP8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 EBF1Q9UH73 591 aa8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 RNF114Q9Y508 228 aa8.72□□□□□ -1.01
SCARNA1-201ENST00000517138 IMPDH2P12268 514 aa8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 LTKP29376 864 aa8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 CCNFP41002 786 aa8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 INTS3Q68E01 1043 aaKnown RBP8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 UNC5AQ6ZN44 842 aa8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.02
SCARNA1-201ENST00000517138 SHOXO15266 292 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 PAX4O43316 350 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 PRAMEF1O95521 474 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 TCF3P15923 654 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 ERCC5P28715 1186 aaPredicted RBP8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 HK2P52789 917 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 TEKQ02763 1124 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 TTC6Q86TZ1 520 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 FAM168AQ92567 244 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 FMNL2Q96PY5 1086 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 TM9SF2Q99805 663 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 SUCOQ9UBS9 1254 aaKnown RBP8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 INPP5FQ9Y2H2 1132 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 LTBP3Q9NS15 1303 aa8.7□□□□□ -1.02
SCARNA1-201ENST00000517138 MEIS1O00470 390 aa8.69□□□□□ -1.02
SCARNA1-201ENST00000517138 GUCY2CP25092 1073 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms