RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PRDM1O75626 825 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FGAP02671 866 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PDE4AP27815 886 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MAPK4P31152 587 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 GRK4P32298 578 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ERVK-9P63128 1117 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ERVK-24P63145 666 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CCNA1P78396 465 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 IRF5Q13568 498 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 VPS53Q5VIR6 699 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
SCARNA16.1-201ENST00000516133 WDR46O15213 610 aaKnown RBP13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 Q3C1V9 767 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 NEDD1Q8NHV4 660 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PXYLP1Q8TE99 480 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SH3TC2Q8TF17 1288 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MKL1Q969V6 931 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 BIN2Q9UBW5 565 aaPredicted RBP13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 GABRQQ9UN88 632 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MYH8P13535 1937 aa13.31□□□□□ -0.28
SCARNA16.1-201ENST00000516133 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ADCY3O60266 1144 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TFAP4Q01664 338 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MB21D1Q8N884 522 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MTMR4Q9NYA4 1195 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 GJD2Q9UKL4 321 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ZMYM6O95789 1325 aa13.3□□□□□ -0.28
SCARNA16.1-201ENST00000516133 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 F5H6K3 240 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FLOT1O75955 427 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TTLL1O95922 423 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FGRP09769 529 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 DSG3P32926 999 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 UBXN2AP68543 259 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 KLRC3Q07444 240 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CEP95Q96GE4 821 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 NUDT12Q9BQG2 462 aa13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCARNA16.1-201ENST00000516133 MGAMO43451 1857 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ORC4O43929 436 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 RAD21O60216 631 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PEX10O60683 326 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PCP11498 1178 aaKnown RBP13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 XRCC5P13010 732 aaKnown RBP13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FAM47AQ5JRC9 791 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SOCS4Q8WXH5 440 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PORCNQ9H237 461 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PDE4DIPQ5VU43 2346 aa13.28□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ZNF213O14771 459 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RANBP6O60518 1105 aaKnown RBP13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CNMDO75829 334 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MYCP01106 439 aaPredicted RBP13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GSPT1P15170 499 aaKnown RBP13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NT5C2P49902 561 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CENPQQ7L2Z9 268 aaPredicted RBP13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GPR142Q7Z601 462 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ADAMTS5Q9UNA0 930 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PLIN4Q96Q06 1357 aa13.27□□□□□ -0.29
SCARNA16.1-201ENST00000516133 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 STRNO43815 780 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NDUFB10O96000 172 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ELNP15502 786 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FAM83BQ5T0W9 1011 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 AKNAD1Q5T1N1 836 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms