RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	GML	Q99445	158 aa		13.82	□□□□□ -0.2
LMNA-224	ENST00000515711	TRIM34	Q9BYJ4	488 aa		13.82	□□□□□ -0.2
LMNA-224	ENST00000515711	PI4KB	Q9UBF8	816 aa		13.82	□□□□□ -0.2
LMNA-224	ENST00000515711	GOLGA6L3	A6NEY3	463 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	MMP1	P03956	469 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	U2AF2	P26368	475 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	FUT2	Q10981	343 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	TNIP1	Q15025	636 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	CCDC183	Q5T5S1	534 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	MYSM1	Q5VVJ2	828 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	FOXP1	Q9H334	677 aa	Predicted RBP	13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	BRMS1	Q9HCU9	246 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	POLR3E	Q9NVU0	708 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	RTEL1	Q9NZ71	1219 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	STX8	Q9UNK0	236 aa		13.81	□□□□□ -0.2
LMNA-224	ENST00000515711	TNRC18	O15417	2968 aa	Predicted RBP	13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	IGKV6D-41	A0A0C4DH26	115 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	SPDYE2B	A6NHP3	402 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	PPFIA3	O75145	1194 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	GADD45B	O75293	160 aa	Predicted RBP	13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	RAD17	O75943	681 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	PLEKHA8P1	O95397	391 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	SPDYE6	P0CI01	402 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	RPS12	P25398	132 aa	Known RBP	13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	NFIA	Q12857	509 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	DLGAP5	Q15398	846 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	ZSCAN23	Q3MJ62	389 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	FKBP1C	Q5VVH2	108 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	CIAPIN1	Q6FI81	312 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	FAM173B	Q6P4H8	233 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	KCNG4	Q8TDN1	519 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	AIFM3	Q96NN9	605 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	TMEM47	Q9BQJ4	181 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	FAM198A	Q9UFP1	575 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	RCOR1	Q9UKL0	485 aa		13.8	□□□□□ -0.2
LMNA-224	ENST00000515711	FSD2	A1L4K1	749 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	MYO1B	O43795	1136 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	SMARCA1	P28370	1054 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	SHMT1	P34896	483 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	NASP	P49321	788 aa	Predicted RBP	13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	METTL16	Q86W50	562 aa	Known RBP	13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	CEP95	Q96GE4	821 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	USP28	Q96RU2	1077 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	SPZ1	Q9BXG8	430 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	SH3GLB2	Q9NR46	395 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	TMEM63C	Q9P1W3	806 aa		13.79	□□□□□ -0.2
LMNA-224	ENST00000515711	NFKBIE	O00221	500 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	TTLL1	O95922	423 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	SCG2	P13521	617 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	PFKFB3	Q16875	520 aa	Predicted RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	OTUD7B	Q6GQQ9	843 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	NOSTRIN	Q8IVI9	506 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	DIS3L2	Q8IYB7	885 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	SRBD1	Q8N5C6	995 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	TDRD3	Q9H7E2	651 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	DDX19A	Q9NUU7	478 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	MTMR4	Q9NYA4	1195 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	TFIP11	Q9UBB9	837 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	HERC5	Q9UII4	1024 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	PASK	Q96RG2	1323 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	ATAD5	Q96QE3	1844 aa		13.78	□□□□□ -0.2
LMNA-224	ENST00000515711	PALM3	A6NDB9	673 aa	Predicted RBP	13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	KIF28P	B7ZC32	967 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	PARP1	P09874	1014 aa	Known RBP	13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	AKR1B1	P15121	316 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	CALML3	P27482	149 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	GUCY1A2	P33402	732 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	KRT2	P35908	639 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	CXCL9	Q07325	125 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	STK38	Q15208	465 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	PKN1	Q16512	942 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	SPDYE2	Q495Y8	402 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	ASPRV1	Q53RT3	343 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	RILPL1	Q5EBL4	403 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	CCDC82	Q8N4S0	544 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	CCDC148	Q8NFR7	591 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	BICD2	Q8TD16	824 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	FAM151A	Q8WW52	585 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	PRMT6	Q96LA8	375 aa	Predicted RBP	13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	PHF20	Q9BVI0	1012 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	MAD2L2	Q9UI95	211 aa		13.77	□□□□□ -0.21
LMNA-224	ENST00000515711		V9GY48	417 aa	Predicted RBP	13.77	□□□□□ -0.21
LMNA-224	ENST00000515711	TMEM88B	A6NKF7	163 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	hCG_1984214	I3L0E3	225 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	MRE11	P49959	708 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	TCP10	Q12799	353 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	CERKL	Q49MI3	558 aa	Predicted RBP	13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	ANO1	Q5XXA6	986 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	TATDN1	Q6P1N9	297 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	LRSAM1	Q6UWE0	723 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	TMEM179	Q6ZVK1	233 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	FAM83A	Q86UY5	434 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	CMTR1	Q8N1G2	835 aa	Known RBP	13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	ZNF713	Q8N859	430 aa	Predicted RBP	13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	LINC00301	Q8NCQ3	95 aa		13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	ZNF70	Q9UC06	446 aa	Predicted RBP	13.76	□□□□□ -0.21
LMNA-224	ENST00000515711	SYNPO2	Q9UMS6	1093 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms