RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CERKLQ49MI3 558 aaPredicted RBP23.23■■□□□ 1.31
TRIO-223ENST00000515710 DIS3L2Q8IYB7 885 aaKnown RBP23.23■■□□□ 1.31
TRIO-223ENST00000515710 ZBED3Q96IU2 234 aaPredicted RBP23.23■■□□□ 1.31
TRIO-223ENST00000515710 KCNJ14Q9UNX9 436 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 MYO1BO43795 1136 aa23.22■■□□□ 1.31
TRIO-223ENST00000515710 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
TRIO-223ENST00000515710 SCG2P13521 617 aa23.22■■□□□ 1.31
TRIO-223ENST00000515710 EIF6P56537 245 aaKnown RBP23.22■■□□□ 1.31
TRIO-223ENST00000515710 PHF20Q9BVI0 1012 aa23.22■■□□□ 1.31
TRIO-223ENST00000515710 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
TRIO-223ENST00000515710 FSD2A1L4K1 749 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 TCP10L2B9ZVM9 353 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 MPHOSPH10O00566 681 aaKnown RBP23.21■■□□□ 1.31
TRIO-223ENST00000515710 NASPP49321 788 aaPredicted RBP23.21■■□□□ 1.31
TRIO-223ENST00000515710 RASSF7Q02833 373 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 NOSTRINQ8IVI9 506 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 PGBD1Q96JS3 809 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 CLIP2Q9UDT6 1046 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 MYH8P13535 1937 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 SIPA1L1O43166 1804 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 CLRN2A0PK11 232 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 BTBD18B2RXH4 712 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 FZD9O00144 591 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 LETM1O95202 739 aaPredicted RBP23.21■■□□□ 1.31
TRIO-223ENST00000515710 CCDC183Q5T5S1 534 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 FTOQ9C0B1 505 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRIO-223ENST00000515710 VPS54Q9P1Q0 977 aa23.21■■□□□ 1.31
TRIO-223ENST00000515710 HERC5Q9UII4 1024 aaKnown RBP23.21■■□□□ 1.31
TRIO-223ENST00000515710 hCG_1642624A0A1W2PR95 340 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 KLRF2D3W0D1 207 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 ZNF280AP59817 542 aaPredicted RBP23.2■■□□□ 1.3
TRIO-223ENST00000515710 ANO1Q5XXA6 986 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 LINC00301Q8NCQ3 95 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 KCNG4Q8TDN1 519 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 CSRNP1Q96S65 589 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 SPZ1Q9BXG8 430 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 MYOZ2Q9NPC6 264 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 SH3GLB2Q9NR46 395 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 STK38Q15208 465 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 L1TD1Q5T7N2 865 aaKnown RBP23.2■■□□□ 1.3
TRIO-223ENST00000515710 FAM83AQ86UY5 434 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 DPF2Q92785 391 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 BRMS1Q9HCU9 246 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 MTMR7Q9Y216 660 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 CLIC4Q9Y696 253 aa23.2■■□□□ 1.3
TRIO-223ENST00000515710 MYH6P13533 1939 aa23.19■■□□□ 1.3
TRIO-223ENST00000515710 KRT2P35908 639 aa23.19■■□□□ 1.3
TRIO-223ENST00000515710 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
TRIO-223ENST00000515710 FAM177A1Q8N128 213 aaPredicted RBP23.19■■□□□ 1.3
TRIO-223ENST00000515710 KANSL2Q9H9L4 492 aa23.19■■□□□ 1.3
TRIO-223ENST00000515710 GREB1LQ9C091 1923 aaPredicted RBP23.18■■□□□ 1.3
TRIO-223ENST00000515710 SNHG28P0DPA3 235 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 PDHBP11177 359 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 ASPRV1Q53RT3 343 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 TMEM179Q6ZVK1 233 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 UBE2Q2Q8WVN8 375 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 MKL1Q969V6 931 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 NYAP2Q9P242 653 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 WNT10BO00744 389 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 SF3A1Q15459 793 aaKnown RBP23.18■■□□□ 1.3
TRIO-223ENST00000515710 USP17L2Q6R6M4 530 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 BICD2Q8TD16 824 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 SHISA4Q96DD7 197 aa23.18■■□□□ 1.3
TRIO-223ENST00000515710 CNTNAP1P78357 1384 aa23.17■■□□□ 1.3
TRIO-223ENST00000515710 FAM196BA6NMK8 535 aa23.17■■□□□ 1.3
TRIO-223ENST00000515710 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
TRIO-223ENST00000515710 PRELPP51888 382 aa23.17■■□□□ 1.3
TRIO-223ENST00000515710 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
TRIO-223ENST00000515710 USP17L5A8MUK1 530 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 SPTLC2O15270 562 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 CYTH3O43739 400 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 GOLGA8HP0CJ92 632 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 SLC39A14Q15043 492 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 ABCB5Q2M3G0 1257 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 RILPL1Q5EBL4 403 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
TRIO-223ENST00000515710 LRRC47Q8N1G4 583 aaKnown RBP23.16■■□□□ 1.3
TRIO-223ENST00000515710 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRIO-223ENST00000515710 CALML3P27482 149 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 ME1P48163 572 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 NLRP5P59047 1200 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 LRSAM1Q6UWE0 723 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
TRIO-223ENST00000515710 TBC1D12O60347 775 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 LIG1P18858 919 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 TNNI2P48788 182 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 SLC35G1Q2M3R5 365 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 ADALQ6DHV7 355 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 GAS2L3Q86XJ1 694 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 OXER1Q8TDS5 423 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 PCDHA7Q9UN72 937 aa23.15■■□□□ 1.3
TRIO-223ENST00000515710 SYCE3A1L190 88 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 PPP6R2O75170 966 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 GMPSP49915 693 aaPredicted RBP23.14■■□□□ 1.3
TRIO-223ENST00000515710 NR5A1Q13285 461 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 NBPF9Q3BBW0 867 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 CLEC10AQ8IUN9 316 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 JMYQ8N9B5 988 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 RRP36Q96EU6 259 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms