RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
LINC01843-201ENST00000515627 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
LINC01843-201ENST00000515627 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
LINC01843-201ENST00000515627 MPHOSPH10O00566 681 aaKnown RBP12.29□□□□□ -0.44
LINC01843-201ENST00000515627 EVI5O60447 810 aa12.29□□□□□ -0.44
LINC01843-201ENST00000515627 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
LINC01843-201ENST00000515627 MAP2K5Q13163 448 aa12.29□□□□□ -0.44
LINC01843-201ENST00000515627 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
LINC01843-201ENST00000515627 NECAB2Q7Z6G3 386 aa12.29□□□□□ -0.44
LINC01843-201ENST00000515627 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
LINC01843-201ENST00000515627 MYH8P13535 1937 aa12.29□□□□□ -0.44
LINC01843-201ENST00000515627 IGHA2P01877 340 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 PTPREP23469 700 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 CCNA1P78396 465 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 GRB14Q14449 540 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 LHX8Q68G74 356 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
LINC01843-201ENST00000515627 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01843-201ENST00000515627 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 ATP8A2Q9NTI2 1148 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 PFASO15067 1338 aa12.28□□□□□ -0.44
LINC01843-201ENST00000515627 PARP14Q460N5 1801 aa12.27□□□□□ -0.44
LINC01843-201ENST00000515627 FRMPD3Q5JV73 1810 aa12.27□□□□□ -0.44
LINC01843-201ENST00000515627 SLC15A5A6NIM6 579 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 USP17L12C9JPN9 530 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 USP17L21D6R901 530 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 HOXC6P09630 235 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 COL6A1P12109 1028 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 CDK8P49336 464 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 COG2Q14746 738 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
LINC01843-201ENST00000515627 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.45
LINC01843-201ENST00000515627 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 SZT2Q5T011 3432 aa12.27□□□□□ -0.45
LINC01843-201ENST00000515627 ZNF236Q9UL36 1845 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 ICA1Q05084 483 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 SPICE1Q8N0Z3 855 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC01843-201ENST00000515627 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 C11orf49Q9H6J7 331 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 STAP2Q9UGK3 403 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
LINC01843-201ENST00000515627 GREB1LQ9C091 1923 aaPredicted RBP12.26□□□□□ -0.45
LINC01843-201ENST00000515627 ABCB7O75027 752 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
LINC01843-201ENST00000515627 TRPV1Q8NER1 839 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 LPAR1Q92633 364 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 ATG4CQ96DT6 458 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 CCDC17Q96LX7 622 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 STRBPQ96SI9 672 aaKnown RBP12.25□□□□□ -0.45
LINC01843-201ENST00000515627 GDF15Q99988 308 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 SPATC1LQ9H0A9 340 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
LINC01843-201ENST00000515627 HOXC10Q9NYD6 342 aa12.25□□□□□ -0.45
LINC01843-201ENST00000515627 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
LINC01843-201ENST00000515627 GSG1L2A8MUP6 293 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 SOX1O00570 391 aaPredicted RBP12.24□□□□□ -0.45
LINC01843-201ENST00000515627 COBLO75128 1261 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
LINC01843-201ENST00000515627 ERCC3P19447 782 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 CYP2C19P33261 490 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 OSBP2Q969R2 916 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 ARHGEF10LQ9HCE6 1279 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
LINC01843-201ENST00000515627 LAMA3Q16787 3333 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 FLOT1O75955 427 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 CYBAP13498 195 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 SYN1P17600 705 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 ADORA2AP29274 412 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 MFSD14CQ5VZR4 134 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 EPB41L4AQ9HCS5 686 aaPredicted RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 FBXO28Q9NVF7 368 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 ARPP21Q9UBL0 812 aaPredicted RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 ADAMTS5Q9UNA0 930 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
LINC01843-201ENST00000515627 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
LINC01843-201ENST00000515627 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
LINC01843-201ENST00000515627 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
LINC01843-201ENST00000515627 M0R2C6 588 aa12.22□□□□□ -0.45
LINC01843-201ENST00000515627 RASA1P20936 1047 aa12.22□□□□□ -0.45
LINC01843-201ENST00000515627 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
LINC01843-201ENST00000515627 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms