RNA–Protein interactions for RNA: ENST00000515600.1

FAM13A-222, Transcript of family with sequence similarity 13 member A, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene FAM13A, Length 2,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-222ENST00000515600 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 CCDC17Q96LX7 622 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 MYOZ2Q9NPC6 264 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 TFIP11Q9UBB9 837 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 NOL7Q9UMY1 257 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 WNT10BO00744 389 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 FIBPO43427 364 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 KIF20AO95235 890 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 ZNF280AP59817 542 aaPredicted RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 TRIM29Q14134 588 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 KRT40Q6A162 431 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 DPF2Q92785 391 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
FAM13A-222ENST00000515600 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
FAM13A-222ENST00000515600 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 MPHOSPH10O00566 681 aaKnown RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 GRM4Q14833 912 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 GTPBP4Q9BZE4 634 aaKnown RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 VEZTQ9HBM0 779 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 TCHHQ07283 1943 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 GADD45BO75293 160 aaPredicted RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 LMNB1P20700 586 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 PKN1Q16512 942 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
FAM13A-222ENST00000515600 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
FAM13A-222ENST00000515600 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 TTLL1O95922 423 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 GNAQP50148 359 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 SCAND2PQ9GZW5 306 aaPredicted RBP11.26□□□□□ -0.61
FAM13A-222ENST00000515600 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 ARFGEF1Q9Y6D6 1849 aa11.26□□□□□ -0.61
FAM13A-222ENST00000515600 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 EGFRP00533 1210 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 CLEC10AQ8IUN9 316 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 CNTNAP5Q8WYK1 1306 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 GOLGA8HP0CJ92 632 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 BRAPQ7Z569 592 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
FAM13A-222ENST00000515600 KCNJ14Q9UNX9 436 aa11.25□□□□□ -0.61
FAM13A-222ENST00000515600 KLRF2D3W0D1 207 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 MBD3O95983 291 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 MMP1P03956 469 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 UBE2HP62256 183 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 SHROOM1Q2M3G4 852 aaPredicted RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 SASS6Q6UVJ0 657 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 ZNF396Q96N95 335 aaPredicted RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 LZTS2Q9BRK4 669 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 TMEM51Q9NW97 253 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 ELP1O95163 1332 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
FAM13A-222ENST00000515600 PDHBP11177 359 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 XBP1P17861 261 aa11.24□□□□□ -0.61
FAM13A-222ENST00000515600 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms