RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 COL4A4P53420 1690 aaPredicted RBP16.69■□□□□ 0.26
SMAD1-216ENST00000515527 RFX7Q2KHR2 1363 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
SMAD1-216ENST00000515527 PKN1Q16512 942 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 TSEN34Q9BSV6 310 aaKnown RBP16.69■□□□□ 0.26
SMAD1-216ENST00000515527 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
SMAD1-216ENST00000515527 TLR3O15455 904 aaKnown RBP16.68■□□□□ 0.26
SMAD1-216ENST00000515527 KCTD2Q14681 263 aa16.68■□□□□ 0.26
SMAD1-216ENST00000515527 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
SMAD1-216ENST00000515527 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
SMAD1-216ENST00000515527 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
SMAD1-216ENST00000515527 CFAP47Q6ZTR5 3102 aa16.68■□□□□ 0.26
SMAD1-216ENST00000515527 COL4A6Q14031 1691 aa16.67■□□□□ 0.26
SMAD1-216ENST00000515527 TAP1Q03518 808 aa16.67■□□□□ 0.26
SMAD1-216ENST00000515527 COL9A2Q14055 689 aaPredicted RBP16.67■□□□□ 0.26
SMAD1-216ENST00000515527 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
SMAD1-216ENST00000515527 BMP8AQ7Z5Y6 402 aa16.67■□□□□ 0.26
SMAD1-216ENST00000515527 ZNF236Q9UL36 1845 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 MOXD2PA6NHM9 499 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 LPXNO60711 386 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 ZP2Q05996 745 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 GLT1D1Q96MS3 346 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 BTBD7Q9P203 1132 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 MUTYHQ9UIF7 546 aa16.66■□□□□ 0.26
SMAD1-216ENST00000515527 KMT2EQ8IZD2 1858 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 STRNO43815 780 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 COBLO75128 1261 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 ASNSP08243 561 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 CDK7P50613 346 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 CCL23P55773 120 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
SMAD1-216ENST00000515527 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
SMAD1-216ENST00000515527 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 LENG1Q96BZ8 264 aaPredicted RBP16.65■□□□□ 0.26
SMAD1-216ENST00000515527 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 LMCD1Q9NZU5 365 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 NCOR2Q9Y618 2525 aa16.65■□□□□ 0.26
SMAD1-216ENST00000515527 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 TMEM221A6NGB7 291 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 M0R296 226 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 ARHGEF15O94989 841 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 KCNA10Q16322 511 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 GDPD5Q8WTR4 605 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 FAM50BQ9Y247 325 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 CHD6Q8TD26 2715 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 ELP1O95163 1332 aa16.64■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L15C9J2P7 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L13C9JLJ4 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L11C9JVI0 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L18D6R9N7 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L22D6RA61 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L17D6RBQ6 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L19D6RCP7 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L20D6RJB6 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 PROB1E7EW31 1015 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 ARVCFO00192 962 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 ADAMTS4O75173 837 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 IRS1P35568 1242 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L24Q0WX57 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 HERC4Q5GLZ8 1057 aaPredicted RBP16.63■□□□□ 0.25
SMAD1-216ENST00000515527 USP17L2Q6R6M4 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 G2E3Q7L622 706 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 DGLUCYQ7Z3D6 616 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 FAM126BQ8IXS8 530 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 UMODL1Q5DID0 1318 aa16.63■□□□□ 0.25
SMAD1-216ENST00000515527 ACACBO00763 2458 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
SMAD1-216ENST00000515527 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 H0Y858 1186 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 H3BQ06 376 aaPredicted RBP16.62■□□□□ 0.25
SMAD1-216ENST00000515527 PDE8BO95263 885 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
SMAD1-216ENST00000515527 AKR1A1P14550 325 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 ADHFE1Q8IWW8 467 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 EDAQ92838 391 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 TLR9Q9NR96 1032 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 NRBP1Q9UHY1 535 aa16.62■□□□□ 0.25
SMAD1-216ENST00000515527 KIF28PB7ZC32 967 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 BTDP43251 543 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
SMAD1-216ENST00000515527 SPRED2Q7Z698 418 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 FBXL6Q8N531 539 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 VPS13AQ96RL7 3174 aa16.61■□□□□ 0.25
SMAD1-216ENST00000515527 GVINP1Q7Z2Y8 2422 aa16.6■□□□□ 0.25
SMAD1-216ENST00000515527 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
SMAD1-216ENST00000515527 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
SMAD1-216ENST00000515527 ALG13Q9NP73 1137 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms