RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 MPHOSPH10O00566 681 aaKnown RBP19.12■□□□□ 0.65
LMNA-223ENST00000515459 ZNF697Q5TEC3 545 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 FAM161BQ96MY7 647 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 COL25A1Q9BXS0 654 aaPredicted RBP19.12■□□□□ 0.65
LMNA-223ENST00000515459 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 SPATC1LQ9H0A9 340 aa19.12■□□□□ 0.65
LMNA-223ENST00000515459 A0A1W2PRG0 241 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 KBTBD13C9JR72 458 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 ERCC3P19447 782 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 TTF1Q15361 905 aaPredicted RBP19.11■□□□□ 0.65
LMNA-223ENST00000515459 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 AACSQ86V21 672 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 CRNKL1Q9BZJ0 848 aaKnown RBP19.11■□□□□ 0.65
LMNA-223ENST00000515459 MCM9Q9NXL9 1143 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 SLC5A4Q9NY91 659 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 MYH8P13535 1937 aa19.11■□□□□ 0.65
LMNA-223ENST00000515459 DNAH12Q6ZR08 3092 aa19.1■□□□□ 0.65
LMNA-223ENST00000515459 SEPT4O43236 478 aa19.1■□□□□ 0.65
LMNA-223ENST00000515459 ANO1Q5XXA6 986 aa19.1■□□□□ 0.65
LMNA-223ENST00000515459 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
LMNA-223ENST00000515459 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
LMNA-223ENST00000515459 PLS1Q14651 629 aa19.09■□□□□ 0.65
LMNA-223ENST00000515459 SLC9C2Q5TAH2 1124 aa19.09■□□□□ 0.65
LMNA-223ENST00000515459 MROH8Q9H579 483 aa19.09■□□□□ 0.65
LMNA-223ENST00000515459 PRDM5Q9NQX1 630 aaPredicted RBP19.09■□□□□ 0.65
LMNA-223ENST00000515459 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
LMNA-223ENST00000515459 UNC80Q8N2C7 3258 aa19.08■□□□□ 0.65
LMNA-223ENST00000515459 COBLO75128 1261 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 PDE6AP16499 860 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 EVX2Q03828 476 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 SNX17Q15036 470 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 SHHQ15465 462 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 CEP85Q6P2H3 762 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 TMEM179Q6ZVK1 233 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 ABRAQ8N0Z2 381 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 SWAP70Q9UH65 585 aa19.08■□□□□ 0.64
LMNA-223ENST00000515459 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.64
LMNA-223ENST00000515459 PARP14Q460N5 1801 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 FLOT1O75955 427 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 DSG3P32926 999 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 TRIM60Q495X7 471 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 NCAPG2Q86XI2 1143 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 SDR42E1Q8WUS8 393 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 ARHGEF10LQ9HCE6 1279 aa19.07■□□□□ 0.64
LMNA-223ENST00000515459 DCP1AQ9NPI6 582 aaPredicted RBP19.07■□□□□ 0.64
LMNA-223ENST00000515459 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 RLBP1P12271 317 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 ADCYAP1R1P41586 468 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 KIAA1755Q5JYT7 1200 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 PRAMEF19Q5SWL8 479 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 C9orf50Q5SZB4 431 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 C1orf53Q5VUE5 145 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 BADQ92934 168 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 MAML3Q96JK9 1138 aa19.06■□□□□ 0.64
LMNA-223ENST00000515459 CDX2Q99626 313 aaPredicted RBP19.06■□□□□ 0.64
LMNA-223ENST00000515459 FCER1AP12319 257 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 LRRC41Q15345 812 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 HSP90AB4PQ58FF6 505 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 LCORLQ8N3X6 602 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 SLC44A5Q8NCS7 719 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 FERMT2Q96AC1 680 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 ATG4CQ96DT6 458 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 TMX2Q9Y320 296 aa19.05■□□□□ 0.64
LMNA-223ENST00000515459 COL11A1P12107 1806 aaPredicted RBP19.04■□□□□ 0.64
LMNA-223ENST00000515459 CYP2D6P10635 497 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 SPICE1Q8N0Z3 855 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 SEMA6BQ9H3T3 888 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 VCPKMTQ9H867 229 aa19.04■□□□□ 0.64
LMNA-223ENST00000515459 SMCHD1A6NHR9 2005 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 TCRBV5S4A2TA0A5A2 114 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 GOLIM4O00461 696 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 WDR46O15213 610 aaKnown RBP19.03■□□□□ 0.64
LMNA-223ENST00000515459 SLC25A27O95847 323 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 SMAD3P84022 425 aaKnown RBP19.03■□□□□ 0.64
LMNA-223ENST00000515459 ICA1Q05084 483 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 SH3RF1Q7Z6J0 888 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 CLEC10AQ8IUN9 316 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 SIAH1Q8IUQ4 282 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
LMNA-223ENST00000515459 DYNLL2Q96FJ2 89 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
LMNA-223ENST00000515459 NRBP1Q9UHY1 535 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 BAZ2AQ9UIF9 1905 aaKnown RBP19.03■□□□□ 0.64
LMNA-223ENST00000515459 PLXNA1Q9UIW2 1896 aa19.03■□□□□ 0.64
LMNA-223ENST00000515459 LAMA2P24043 3122 aaKnown RBP19.02■□□□□ 0.64
LMNA-223ENST00000515459 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 RARBP10826 455 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 AKR1B1P15121 316 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
LMNA-223ENST00000515459 CLASRPQ8N2M8 674 aaKnown RBP19.02■□□□□ 0.64
LMNA-223ENST00000515459 MAFAQ8NHW3 353 aaPredicted RBP19.02■□□□□ 0.64
LMNA-223ENST00000515459 TRIM43Q96BQ3 446 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms