RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 VCAM1P19320 739 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 HOXA7P31268 230 aaPredicted RBP12.09□□□□□ -0.47
SSBP2-219ENST00000515395 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 LPAR1Q92633 364 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 ESYT1Q9BSJ8 1104 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 NYAP2Q9P242 653 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 PLIN4Q96Q06 1357 aa12.09□□□□□ -0.47
SSBP2-219ENST00000515395 TTLL1O95922 423 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 FGRP09769 529 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.48
SSBP2-219ENST00000515395 C17orf99Q6UX52 265 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
SSBP2-219ENST00000515395 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 ESR2Q92731 530 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
SSBP2-219ENST00000515395 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
SSBP2-219ENST00000515395 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 PARP14Q460N5 1801 aa12.08□□□□□ -0.48
SSBP2-219ENST00000515395 NT5C2P49902 561 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 PTH1RQ03431 593 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 TRDNQ13061 729 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 ANKRD13CQ8N6S4 541 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 CD99L2Q8TCZ2 262 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
SSBP2-219ENST00000515395 P2RX7Q99572 595 aaKnown RBP12.07□□□□□ -0.48
SSBP2-219ENST00000515395 CNNM2Q9H8M5 875 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 ADGRA2Q96PE1 1338 aa12.07□□□□□ -0.48
SSBP2-219ENST00000515395 IGKV6D-41A0A0C4DH26 115 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 WDR46O15213 610 aaKnown RBP12.06□□□□□ -0.48
SSBP2-219ENST00000515395 HERVK_113P62684 666 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
SSBP2-219ENST00000515395 PKN2Q16513 984 aaKnown RBP12.06□□□□□ -0.48
SSBP2-219ENST00000515395 CATSPERGQ6ZRH7 1159 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 KRT23Q9C075 422 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 SYNPO2Q9UMS6 1093 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
SSBP2-219ENST00000515395 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
SSBP2-219ENST00000515395 NEDD4P46934 1319 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 F5H6K3 240 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 BCRP11274 1271 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 KLRC3Q07444 240 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 COG2Q14746 738 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 FAM110CQ1W6H9 321 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 CCDC178Q5BJE1 867 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 IQCA1Q86XH1 822 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 MKL1Q969V6 931 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 RLFQ13129 1914 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 B4E1Z4 1266 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 NMT2O60551 498 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 KDM4AO75164 1064 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 FLOT1O75955 427 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 GNRH1P01148 92 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 HOXD10P28358 340 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 PSMC4P43686 418 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 FCGRTP55899 365 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 PAGR1Q9BTK6 254 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 IL17RBQ9NRM6 502 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 TCP11L1Q9NUJ3 509 aa12.05□□□□□ -0.48
SSBP2-219ENST00000515395 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
SSBP2-219ENST00000515395 DOCK3Q8IZD9 2030 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 NDUFB10O96000 172 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 CYP21A2P08686 494 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 OTOP1Q7RTM1 612 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
SSBP2-219ENST00000515395 GMCL1P1Q8NEA9 526 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 TTC14Q96N46 770 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 MORF4L1Q9UBU8 362 aa12.04□□□□□ -0.48
SSBP2-219ENST00000515395 RABGAP1Q9Y3P9 1069 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms