RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CD302Q8IX05 232 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 P3H4Q92791 437 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 DDX21Q9NR30 783 aaKnown RBP eCLIP14.35□□□□□ -0.117e-6■■■■■ 43.5
SMAD1-215ENST00000515385 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 REXO2Q9Y3B8 237 aaKnown RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 ENC1O14682 589 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 ZMYND10O75800 440 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 PPP1R37O75864 691 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 RAPGEF3O95398 923 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 FAM107AO95990 144 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 GCKRQ14397 625 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 C6orf89Q6UWU4 347 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 GSPT2Q8IYD1 628 aaKnown RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 CAPZA3Q96KX2 299 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 CCDC114Q96M63 670 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 RABEP2Q9H5N1 569 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 C4AP0C0L4 1744 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 STK36Q9NRP7 1315 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 KCNQ3O43525 872 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 ICA1Q05084 483 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 RABL6Q3YEC7 729 aaPredicted RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 GLE1Q53GS7 698 aaKnown RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 TLDC1Q6P9B6 456 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 NLRP14Q86W24 1093 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 NOSTRINQ8IVI9 506 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 ARL8AQ96BM9 186 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 BORCS6Q96GS4 357 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 TSGA10Q9BZW7 698 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 MST1RQ04912 1400 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 SRGAP2O75044 1071 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 ZFYP08048 801 aaPredicted RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 PAX7P23759 505 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 CYLC1P35663 651 aaPredicted RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 COPB1P53618 953 aaKnown RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 GRIK3Q13003 919 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 KRT31Q15323 416 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 AKAP4Q5JQC9 854 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 CYB5D1Q6P9G0 228 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 MAB21L3Q8N8X9 362 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 DNAJC7Q99615 494 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
SMAD1-215ENST00000515385 DDX20Q9UHI6 824 aaKnown RBP14.34□□□□□ -0.11
SMAD1-215ENST00000515385 SPEF2Q9C093 1822 aa14.33□□□□□ -0.11
SMAD1-215ENST00000515385 MPHOSPH10O00566 681 aaKnown RBP14.33□□□□□ -0.12
SMAD1-215ENST00000515385 IPO7O95373 1038 aaKnown RBP14.33□□□□□ -0.12
SMAD1-215ENST00000515385 ANTXR2P58335 489 aa14.33□□□□□ -0.12
SMAD1-215ENST00000515385 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.33□□□□□ -0.12
SMAD1-215ENST00000515385 ARMC2Q8NEN0 867 aa14.33□□□□□ -0.12
SMAD1-215ENST00000515385 MYCBPAPQ8TBZ2 947 aa14.33□□□□□ -0.12
SMAD1-215ENST00000515385 CENPHQ9H3R5 247 aa14.33□□□□□ -0.12
SMAD1-215ENST00000515385 ANGEL1Q9UNK9 670 aaKnown RBP14.33□□□□□ -0.12
SMAD1-215ENST00000515385 HMGB1P1B2RPK0 211 aaPredicted RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 HERVK_113P62684 666 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 ZC3H12AQ5D1E8 599 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 KLHL10Q6JEL2 608 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 CEP57Q86XR8 500 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 CCDC170Q8IYT3 715 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 HOOK2Q96ED9 719 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 RSRC1Q96IZ7 334 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 ROBO2Q9HCK4 1378 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 MDH1P40925 334 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 STX17P56962 302 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 C2orf54Q08AI8 447 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 IFT88Q13099 833 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 TTF1Q15361 905 aaPredicted RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 ARMC9Q7Z3E5 817 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 FUKQ8N0W3 1084 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 MREGQ8N565 214 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 AIFM3Q96NN9 605 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms