RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
CSF1R-208ENST00000515239 NEUROD6Q96NK8 337 aa14.54□□□□□ -0.08
CSF1R-208ENST00000515239 TOX2Q96NM4 488 aa14.54□□□□□ -0.08
CSF1R-208ENST00000515239 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 A0A1W2PQ45 241 aaPredicted RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 A0A1W2PQY0 241 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 TIMP1P01033 207 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 PLCG2P16885 1265 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 ERCC3P19447 782 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 IGFBP4P22692 258 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 ARID4AP29374 1257 aaPredicted RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 MCAMP43121 646 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 TMEM240Q5SV17 173 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 FEZ1Q99689 392 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 NOL10Q9BSC4 688 aaKnown RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 EPHX3Q9H6B9 360 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 RPAP3Q9H6T3 665 aaPredicted RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 XPNPEP3Q9NQH7 507 aa14.53□□□□□ -0.08
CSF1R-208ENST00000515239 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 SAP30BPQ9UHR5 308 aaKnown RBP14.53□□□□□ -0.08
CSF1R-208ENST00000515239 DCDC2CA8MYV0 355 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 PGK1P00558 417 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 RAB3GAP1Q15042 981 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.09
CSF1R-208ENST00000515239 MFSD5Q6N075 450 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 RNF180Q86T96 592 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 SPATC1LQ9H0A9 340 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.09
CSF1R-208ENST00000515239 CDK5RAP2Q96SN8 1893 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 CHD9Q3L8U1 2897 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 HLA-DOAP06340 250 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 RARBP10826 455 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 COG2Q14746 738 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 ATF7IPQ6VMQ6 1270 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 ABRAQ8N0Z2 381 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 SLC5A4Q9NY91 659 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 TBX21Q9UL17 535 aa14.51□□□□□ -0.09
CSF1R-208ENST00000515239 PIEZO1Q92508 2521 aa14.5□□□□□ -0.09
CSF1R-208ENST00000515239 TFF2Q03403 129 aa14.5□□□□□ -0.09
CSF1R-208ENST00000515239 GORABQ5T7V8 394 aa14.5□□□□□ -0.09
CSF1R-208ENST00000515239 NRBP1Q9UHY1 535 aa14.5□□□□□ -0.09
CSF1R-208ENST00000515239 HCN4Q9Y3Q4 1203 aa14.5□□□□□ -0.09
CSF1R-208ENST00000515239 ADAMTS4O75173 837 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 CSF2RAP15509 400 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 TAL1P17542 331 aaPredicted RBP14.49□□□□□ -0.09
CSF1R-208ENST00000515239 GUCY1A2P33402 732 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 KCNQ1P51787 676 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 DYNLL1P63167 89 aaKnown RBP14.49□□□□□ -0.09
CSF1R-208ENST00000515239 PPIGQ13427 754 aaKnown RBP eCLIP14.49□□□□□ -0.09
CSF1R-208ENST00000515239 ABCB5Q2M3G0 1257 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
CSF1R-208ENST00000515239 ZNF365Q70YC5 407 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 TSEN34Q9BSV6 310 aaKnown RBP14.49□□□□□ -0.09
CSF1R-208ENST00000515239 MROH8Q9H579 483 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 SNRKQ9NRH2 765 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 FOCADQ5VW36 1801 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 XIRP2A4UGR9 3374 aa14.49□□□□□ -0.09
CSF1R-208ENST00000515239 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
CSF1R-208ENST00000515239 ACRP10323 421 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 CDK7P50613 346 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 ACLYP53396 1101 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 RAB30Q15771 203 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 EHD4Q9H223 541 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
CSF1R-208ENST00000515239 NKX2-4Q9H2Z4 354 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 STARD7Q9NQZ5 370 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 MSRAQ9UJ68 235 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
CSF1R-208ENST00000515239 YBX2Q9Y2T7 364 aaKnown RBP14.48□□□□□ -0.09
CSF1R-208ENST00000515239 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
CSF1R-208ENST00000515239 A0A1W2PRG0 241 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 UQCRFS1P1P0C7P4 283 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 FCER1AP12319 257 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 DSG3P32926 999 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 CCSAPQ6IQ19 270 aaPredicted RBP14.47□□□□□ -0.09
CSF1R-208ENST00000515239 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 NCAPG2Q86XI2 1143 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 KLHDC9Q8NEP7 349 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 NUP133Q8WUM0 1156 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 LENG1Q96BZ8 264 aaPredicted RBP14.47□□□□□ -0.09
CSF1R-208ENST00000515239 TINF2Q9BSI4 451 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 SLC28A3Q9HAS3 691 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 MRS2Q9HD23 443 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 CABP5Q9NP86 173 aa14.47□□□□□ -0.09
CSF1R-208ENST00000515239 ZNF521Q96K83 1311 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 SRGAP3O43295 1099 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 CYP2E1P05181 493 aaPredicted RBP14.46□□□□□ -0.09
CSF1R-208ENST00000515239 SHMT1P34896 483 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 PLS1Q14651 629 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 AAK1Q2M2I8 961 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 ZNF792Q3KQV3 632 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 TMEM31Q5JXX7 168 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 KIAA1755Q5JYT7 1200 aa14.46□□□□□ -0.09
CSF1R-208ENST00000515239 ALYREFQ86V81 257 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms