RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TESPA1A2RU30 521 aaPredicted RBP17.76■□□□□ 0.43
TRIM41-207ENST00000515223 MNAT1P51948 309 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 CTSWP56202 376 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 GABPB1Q06547 395 aaPredicted RBP17.76■□□□□ 0.43
TRIM41-207ENST00000515223 UNC5CLQ8IV45 518 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 ALAS1P13196 640 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 ANKRD35Q8N283 1001 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 KIF24Q5T7B8 1368 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 PAK1Q13153 545 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 SETDB1Q15047 1291 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 NRBP1Q9UHY1 535 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 RGS12O14924 1447 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 TNNI1P19237 187 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
TRIM41-207ENST00000515223 ITIH3Q06033 890 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 MCF2L2Q86YR7 1114 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 AFAP1L2Q8N4X5 818 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 CPLX4Q7Z7G2 160 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 IGSF22Q8N9C0 903 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 MICALL1Q8N3F8 863 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 TPH2Q8IWU9 490 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 CTTNBP2NLQ9P2B4 639 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 DNAJC21Q5F1R6 531 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
TRIM41-207ENST00000515223 EDC3Q96F86 508 aaKnown RBP17.75■□□□□ 0.43
TRIM41-207ENST00000515223 CCNA1P78396 465 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 DYMQ7RTS9 669 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 CABP7Q86V35 215 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 MAPK8IP1Q9UQF2 711 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 TCP10L2B9ZVM9 353 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 MLKLQ8NB16 471 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 VGLL3A8MV65 326 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 ANO3Q9BYT9 981 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 NOC2LQ9Y3T9 749 aaKnown RBP17.74■□□□□ 0.43
TRIM41-207ENST00000515223 KDM3AQ9Y4C1 1321 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 ATP7AQ04656 1500 aa17.74■□□□□ 0.43
TRIM41-207ENST00000515223 H0YCG3 227 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 TMOD1P28289 359 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 CERKLQ49MI3 558 aaPredicted RBP17.73■□□□□ 0.43
TRIM41-207ENST00000515223 SRGAP1Q7Z6B7 1085 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 UBLCP1Q8WVY7 318 aaPredicted RBP17.73■□□□□ 0.43
TRIM41-207ENST00000515223 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 ERCC6LQ2NKX8 1250 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
TRIM41-207ENST00000515223 ARHGEF5Q12774 1597 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 ATF7P17544 494 aaPredicted RBP17.73■□□□□ 0.43
TRIM41-207ENST00000515223 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
TRIM41-207ENST00000515223 PPARAQ07869 468 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 SYNRGQ9UMZ2 1314 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 USP17L21D6R901 530 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 PPP2R5DQ14738 602 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 FAM47AQ5JRC9 791 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 NCAPG2Q86XI2 1143 aa17.73■□□□□ 0.43
TRIM41-207ENST00000515223 POLR2MP0CAP2 368 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 TAOK1Q7L7X3 1001 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 SEC62Q99442 399 aaKnown RBP17.72■□□□□ 0.43
TRIM41-207ENST00000515223 XPO4Q9C0E2 1151 aaKnown RBP17.72■□□□□ 0.43
TRIM41-207ENST00000515223 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 USTQ9Y2C2 406 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 FLOT1O75955 427 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 HSPA1LP34931 641 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 CYP26C1Q6V0L0 522 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 CCDC121Q6ZUS5 278 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 NBPF11Q86T75 865 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 PCDHB13Q9Y5F0 798 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 RXRBP28702 533 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
TRIM41-207ENST00000515223 DOK7Q18PE1 504 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 CCDC84Q86UT8 332 aaPredicted RBP17.71■□□□□ 0.43
TRIM41-207ENST00000515223 TBC1D7Q9P0N9 293 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 TTLL3Q9Y4R7 772 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 ZNF202O95125 648 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
TRIM41-207ENST00000515223 RAD51AP2Q09MP3 1159 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 KRT40Q6A162 431 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 HDXQ7Z353 690 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 SSH2Q76I76 1423 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 CUL4BQ13620 913 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 LGSNQ5TDP6 509 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 NELFCDQ8IXH7 590 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 USP44Q9H0E7 712 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 UGGT1Q9NYU2 1555 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
TRIM41-207ENST00000515223 MED10Q9BTT4 135 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms