RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TRIB2Q92519 343 aa17.61■□□□□ 0.41
SGCA-211ENST00000514934 CRISPLD2Q9H0B8 497 aa17.61■□□□□ 0.41
SGCA-211ENST00000514934 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
SGCA-211ENST00000514934 RASA1P20936 1047 aa17.6■□□□□ 0.41
SGCA-211ENST00000514934 SMC5Q8IY18 1101 aa17.6■□□□□ 0.41
SGCA-211ENST00000514934 U2AF1L4Q8WU68 220 aaKnown RBP17.6■□□□□ 0.41
SGCA-211ENST00000514934 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
SGCA-211ENST00000514934 RNF208Q9H0X6 261 aa17.6■□□□□ 0.41
SGCA-211ENST00000514934 ARPP21Q9UBL0 812 aaPredicted RBP17.6■□□□□ 0.41
SGCA-211ENST00000514934 SZT2Q5T011 3432 aa17.6■□□□□ 0.41
SGCA-211ENST00000514934 MCM3APO60318 1980 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 IGKV6D-41A0A0C4DH26 115 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 MPHOSPH10O00566 681 aaKnown RBP17.59■□□□□ 0.41
SGCA-211ENST00000514934 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
SGCA-211ENST00000514934 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
SGCA-211ENST00000514934 UBXN2AP68543 259 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 ICA1Q05084 483 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 GPR142Q7Z601 462 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
SGCA-211ENST00000514934 ERC2O15083 957 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 SGPL1O95470 568 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 HMGCRP04035 888 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 MAPK4P31152 587 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 PDE1AP54750 535 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 VCPKMTQ9H867 229 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 ADAMTS5Q9UNA0 930 aa17.58■□□□□ 0.4
SGCA-211ENST00000514934 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 PLIN4Q96Q06 1357 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 IGHDP01880 384 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
SGCA-211ENST00000514934 AAMPQ13685 434 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 SOCS4Q8WXH5 440 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 LPAR1Q92633 364 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
SGCA-211ENST00000514934 CCL14Q16627 93 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 PLEKHH3Q7Z736 793 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 IFNL3Q8IZI9 196 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
SGCA-211ENST00000514934 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
SGCA-211ENST00000514934 LCTP09848 1927 aa17.56■□□□□ 0.4
SGCA-211ENST00000514934 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
SGCA-211ENST00000514934 HOXC6P09630 235 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 GNAT2P19087 354 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 CYP2B6P20813 491 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 DSG3P32926 999 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 GRB14Q14449 540 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 COG2Q14746 738 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 FSD1Q9BTV5 496 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 FLRT1Q9NZU1 646 aa17.55■□□□□ 0.4
SGCA-211ENST00000514934 WDR46O15213 610 aaKnown RBP17.54■□□□□ 0.4
SGCA-211ENST00000514934 PTPREP23469 700 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 REPS2Q8NFH8 660 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 APBA2Q99767 749 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 MOV10L1Q9BXT6 1211 aaKnown RBP17.54■□□□□ 0.4
SGCA-211ENST00000514934 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
SGCA-211ENST00000514934 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 MINDY4BA8MYZ0 360 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 MAP2K5Q13163 448 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 SPATC1LQ9H0A9 340 aa17.53■□□□□ 0.4
SGCA-211ENST00000514934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
SGCA-211ENST00000514934 SLC15A5A6NIM6 579 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 FARP2O94887 1054 aaPredicted RBP17.52■□□□□ 0.4
SGCA-211ENST00000514934 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
SGCA-211ENST00000514934 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.4
SGCA-211ENST00000514934 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 SHCBP1Q8NEM2 672 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 NPLOC4Q8TAT6 608 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 DIS3LQ8TF46 1054 aaKnown RBP17.52■□□□□ 0.4
SGCA-211ENST00000514934 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
SGCA-211ENST00000514934 LAMA2P24043 3122 aaKnown RBP17.52■□□□□ 0.4
SGCA-211ENST00000514934 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 PRDM1O75626 825 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 RGS2P41220 211 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 TDO2P48775 406 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 CCNA1P78396 465 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 NUCB1Q02818 461 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 LHX8Q68G74 356 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 PLEKHM2Q8IWE5 1019 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 STK11IPQ8N1F8 1099 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 MKL1Q969V6 931 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms