RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 P3H1Q32P28 736 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 PNMA8AQ86V59 439 aaPredicted RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 SLC7A5P1Q8MH63 180 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 CYFIP2Q96F07 1278 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 PANK4Q9NVE7 773 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDH6-205ENST00000514738 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 HTR3EA5X5Y0 456 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 EPB41P11171 864 aaKnown RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 TRIM68Q6AZZ1 485 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 ANKRD13BQ86YJ7 626 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 NSUN7Q8NE18 718 aaKnown RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
CDH6-205ENST00000514738 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 NDST4Q9H3R1 872 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 GOLPH3LQ9H4A5 285 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 ASXL1Q8IXJ9 1541 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 CCND1P24385 295 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 CCNG1P51959 295 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 GSTM4Q03013 218 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 NAA16Q6N069 864 aaPredicted RBP18.06■□□□□ 0.48
CDH6-205ENST00000514738 ARHGAP18Q8N392 663 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 DEPTORQ8TB45 409 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 SREK1Q8WXA9 508 aaKnown RBP18.06■□□□□ 0.48
CDH6-205ENST00000514738 SLC39A3Q9BRY0 314 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 TTMPQ5BVD1 217 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 LMNTD2Q8IXW0 634 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 TTC30BQ8N4P2 665 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.06■□□□□ 0.48
CDH6-205ENST00000514738 SNX27Q96L92 541 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
CDH6-205ENST00000514738 ANKRD27Q96NW4 1050 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 VCX3BQ9H321 246 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 VCX3AQ9NNX9 186 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 PRELID1Q9Y255 219 aa18.06■□□□□ 0.48
CDH6-205ENST00000514738 MED14O60244 1454 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 LMNB1P20700 586 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 SP100P23497 879 aaPredicted RBP18.05■□□□□ 0.48
CDH6-205ENST00000514738 HOXD10P28358 340 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 USP14P54578 494 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 USH1GQ495M9 461 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 C3orf67Q6ZVT6 689 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 TMCO5AQ8N6Q1 288 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 ARL8AQ96BM9 186 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 GGNBP2Q9H3C7 697 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 NSD2O96028 1365 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 ALADP13716 330 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 FERMT3Q86UX7 667 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 SESTD1Q86VW0 696 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 WDR75Q8IWA0 830 aaKnown RBP18.05■□□□□ 0.48
CDH6-205ENST00000514738 P3H4Q92791 437 aa18.05■□□□□ 0.48
CDH6-205ENST00000514738 MOV10L1Q9BXT6 1211 aaKnown RBP18.05■□□□□ 0.48
CDH6-205ENST00000514738 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
CDH6-205ENST00000514738 E7EVH7 732 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 TSPY4P0CV99 314 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 TSPY10P0CW01 314 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 GHRP10912 638 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 PKD2Q13563 968 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 CCDC125Q86Z20 511 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 ESYT1Q9BSJ8 1104 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.04■□□□□ 0.48
CDH6-205ENST00000514738 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 hCG_2014768A0A024R1R8 64 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 DTNBO60941 627 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 TMEM154Q6P9G4 183 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 KDM7AQ6ZMT4 941 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 CCDC63Q8NA47 563 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 ZNF180Q9UJW8 692 aa18.04■□□□□ 0.48
CDH6-205ENST00000514738 BOLA2-SMG1P6H3BVE0 249 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 HNRNPRO43390 633 aaKnown RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 NFKBIAP25963 317 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 VARSP26640 1264 aaKnown RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 ZNF554Q86TJ5 538 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 ZMAT2Q96NC0 199 aaKnown RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 RPS6KC1Q96S38 1066 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 CDC5LQ99459 802 aaKnown RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 PPME1Q9Y570 386 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 TARSL2A2RTX5 802 aaKnown RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 CTAGE9A4FU28 777 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 TCF7P36402 384 aaPredicted RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 RFC5P40937 340 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 NLRP5P59047 1200 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 KLC1Q07866 573 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 SLC44A4Q53GD3 710 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 ZNF362Q5T0B9 420 aaPredicted RBP18.03■□□□□ 0.48
CDH6-205ENST00000514738 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 MAEAQ7L5Y9 396 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
CDH6-205ENST00000514738 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms