RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 CYP19A1P11511 503 aaPredicted RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 MECOMQ03112 1051 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 CKAP4Q07065 602 aaKnown RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 SLFN13Q68D06 897 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 FRMD4BQ9Y2L6 1034 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 IGSF3O75054 1194 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 GDF11O95390 407 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 EPB41P11171 864 aaKnown RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 ALAS1P13196 640 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 PRDX5P30044 214 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 PSMB7Q99436 277 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 FAM207AQ9NSI2 230 aaPredicted RBP6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 FANCLQ9NW38 375 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 PCDHA5Q9Y5H7 936 aa6.9□□□□□ -1.3
ATP2C1-222ENST00000514654 GCNT3O95395 438 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 KCTD1Q719H9 257 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 GRAMD1CQ8IYS0 662 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 TTC16Q8NEE8 873 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 TSC1Q92574 1164 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 SYMPKQ92797 1274 aaKnown RBP6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 SLF1Q9BQI6 1058 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 TAOK3Q9H2K8 898 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 NLRC4Q9NPP4 1024 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 CEP152O94986 1710 aa6.9□□□□□ -1.31
ATP2C1-222ENST00000514654 ARHGEF40Q8TER5 1519 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 B4DLN1 442 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 ZBED4O75132 1171 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 BBOX1O75936 387 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 MMP10P09238 476 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CYP2D6P10635 497 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CACNB3P54284 484 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 UBXN2AP68543 259 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SCARF1Q14162 830 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 USP17L2Q6R6M4 530 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 IFT81Q8WYA0 676 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GOLGA1Q92805 767 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CSRNP2Q9H175 543 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GLT8D2Q9H1C3 349 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 USP31Q70CQ4 1352 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GOLGA6L10A0A0M3HER8 536 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SH2B2O14492 632 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CYP4A11Q02928 519 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 TBC1D9BQ66K14 1250 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 NEK8Q86SG6 692 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SELENOOQ9BVL4 669 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 DNAI2Q9GZS0 605 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 MRPL44Q9H9J2 332 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 PCDHA12Q9UN75 941 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SHTN1A0MZ66 631 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 H7C1D1 291 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 RPS6KA4O75676 772 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 KRT5P13647 590 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 KIF23Q02241 960 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SLC39A14Q15043 492 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CEP112Q8N8E3 955 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 BSDC1Q9NW68 430 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 PCDHB13Q9Y5F0 798 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 EXOC3O60645 756 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GAS7O60861 476 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 DDAH1O94760 285 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 OR52Z1P0C646 297 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 RXRBP28702 533 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 EVCP57679 992 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 MAPK8IP2Q13387 824 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 ABCB5Q2M3G0 1257 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 EAPPQ56P03 285 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 DESI2Q9BSY9 194 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 CARD6Q9BX69 1037 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 GTPBP4Q9BZE4 634 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 SLC39A2Q9NP94 309 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 MINPP1Q9UNW1 487 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 ABCA9Q8IUA7 1624 aa6.89□□□□□ -1.31
ATP2C1-222ENST00000514654 TESPA1A2RU30 521 aaPredicted RBP6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 SEMA3EO15041 775 aa6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 MAP2K1Q02750 393 aaPredicted RBP6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 GPBP1Q86WP2 473 aa6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 CCDC50Q8IVM0 306 aa6.88□□□□□ -1.31
ATP2C1-222ENST00000514654 CHURC1Q8WUH1 139 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms