RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 AATFQ9NY61 560 aaKnown RBP eCLIP20.54■□□□□ 0.88
TNFRSF8-205ENST00000514649 L1RE1Q9UN81 338 aa20.54■□□□□ 0.88
TNFRSF8-205ENST00000514649 PPP1R3GB7ZBB8 358 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 POTEB2H3BUK9 544 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 N4BP1O75113 896 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 RHOXF2BP0C7M4 288 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 FILIP1LQ4L180 1135 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 LEKR1Q6ZMV7 388 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 SH3RF1Q7Z6J0 888 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 MSL3Q8N5Y2 521 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 RHOXF2Q9BQY4 288 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
TNFRSF8-205ENST00000514649 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 ERICH2A1L162 156 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 TRIM75PA6NK02 468 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 DPYDQ12882 1025 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 TUBB2AQ13885 445 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 GIGYF2Q6Y7W6 1299 aaKnown RBP20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 FAM43BQ6ZT52 329 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 CNGA4Q8IV77 575 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 DNAJC10Q8IXB1 793 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 TUBB2BQ9BVA1 445 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 CHD4Q14839 1912 aa20.52■□□□□ 0.88
TNFRSF8-205ENST00000514649 ERLIN1O75477 346 aa20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 TDO2P48775 406 aa20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 MAP3K12Q12852 859 aa20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 STAG1Q8WVM7 1258 aa20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 SYMPKQ92797 1274 aaKnown RBP20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.87
TNFRSF8-205ENST00000514649 IRS4O14654 1257 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 CCT6AP40227 531 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 MAGEA9P43362 315 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 ZNF654Q8IZM8 581 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 STAMQ92783 540 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 GSDMAQ96QA5 445 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 RNF225M0QZC1 329 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 SNAP23O00161 211 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 VSNL1P62760 191 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 ERVK-24P63145 666 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 VPS54Q9P1Q0 977 aa20.51■□□□□ 0.87
TNFRSF8-205ENST00000514649 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 MYH8P13535 1937 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 SEMA3EO15041 775 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 RASGRF1Q13972 1273 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 LPIN2Q92539 896 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 CCDC51Q96ER9 411 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 NAPGQ99747 312 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 SLC4A4Q9Y6R1 1079 aa20.5■□□□□ 0.87
TNFRSF8-205ENST00000514649 FECHP22830 423 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CDC25AP30304 524 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 TUBB4BP68371 445 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 PUM3Q15397 648 aaKnown RBP20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CTAGE15A4D2H0 777 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 WNT7AO00755 349 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CTAGE8P0CG41 777 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CTAGE6Q86UF2 777 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 TMTC1Q8IUR5 882 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CTAGE4Q8IX94 777 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 CTNND2Q9UQB3 1225 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 FAN1Q9Y2M0 1017 aa20.49■□□□□ 0.87
TNFRSF8-205ENST00000514649 EIF3JO75822 258 aaKnown RBP20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 FGFR2P21802 821 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 GUCY2CP25092 1073 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 ARHGAP25P42331 645 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 KRT31Q15323 416 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 NACAP1Q9BZK3 213 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 ABHD10Q9NUJ1 306 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 PAPPAQ13219 1627 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 ITIH6Q6UXX5 1313 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 N4BP3O15049 544 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 PRDM1O75626 825 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 CASP8Q14790 479 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 TTC31Q49AM3 519 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 VPS16Q9H269 839 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 ASAP1Q9ULH1 1129 aa20.48■□□□□ 0.87
TNFRSF8-205ENST00000514649 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 PKN1Q16512 942 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 NBPF20Q3BBV1 942 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 EGFL6Q8IUX8 553 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 NOA1Q8NC60 698 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 RNF26Q9BY78 433 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 COL22A1Q8NFW1 1626 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 ZNF174Q15697 407 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 WHAMMP3Q1A5X7 153 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 NUP88Q99567 741 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 SLF1Q9BQI6 1058 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
TNFRSF8-205ENST00000514649 BLZF1Q9H2G9 400 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms