RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	METTL12	A8MUP2	240 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	SOX1	O00570	391 aa	Predicted RBP	8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	DDX3Y	O15523	660 aa	Known RBP	8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	PRR23C	Q6ZRP0	262 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	UBASH3B	Q8TF42	649 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	TCF12	Q99081	682 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	CEP41	Q9BYV8	373 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	SOX17	Q9H6I2	414 aa	Predicted RBP	8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	SPG7	Q9UQ90	795 aa		8.67	□□□□□ -1.02
HIPK1-210	ENST00000514621	BCL9	O00512	1426 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	PCDH11X	Q9BZA7	1347 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	PCDH11Y	Q9BZA8	1340 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	CYP27B1	O15528	508 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	TRIM37	O94972	964 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	U2AF1L5	P0DN76	240 aa	Predicted RBP	8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	ESRRA	P11474	423 aa	Predicted RBP	8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	NLRP12	P59046	1061 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	U2AF1	Q01081	240 aa	Known RBP eCLIP	8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	PLEKHO1	Q53GL0	409 aa	Predicted RBP	8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	KIAA1211	Q6ZU35	1233 aa		8.66	□□□□□ -1.02
HIPK1-210	ENST00000514621	PLEKHG2	Q9H7P9	1386 aa		8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	PDIA4	P13667	645 aa	Known RBP	8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	GRIA4	P48058	902 aa		8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	PLCB3	Q01970	1234 aa		8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	AMOT	Q4VCS5	1084 aa		8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	PTF1A	Q7RTS3	328 aa		8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.65	□□□□□ -1.02
HIPK1-210	ENST00000514621	EP400	Q96L91	3159 aa		8.65	□□□□□ -1.03
HIPK1-210	ENST00000514621	PKD1L3	Q7Z443	1732 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	SHANK3	Q9BYB0	1731 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	KCNQ2	O43526	872 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	GADD45B	O75293	160 aa	Predicted RBP	8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	PHKG2	P15735	406 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	SPRED3	Q2MJR0	410 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	HGSNAT	Q68CP4	663 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	ZNF530	Q6P9A1	599 aa	Predicted RBP	8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	IFNL2	Q8IZJ0	200 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	ACSBG1	Q96GR2	724 aa		8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	UBL7	Q96S82	380 aa	Predicted RBP	8.64	□□□□□ -1.03
HIPK1-210	ENST00000514621	SCO2	A0A1W2PP80	73 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	TREH	O43280	583 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	PRKAR2B	P31323	418 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	PCDH1	Q08174	1060 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	DSC3	Q14574	896 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	MTHFSD	Q2M296	383 aa	Known RBP	8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	FAM9B	Q8IZU0	186 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	PHACTR3	Q96KR7	559 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	RNF208	Q9H0X6	261 aa		8.63	□□□□□ -1.03
HIPK1-210	ENST00000514621	GSTM4	Q03013	218 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	UVSSA	Q2YD98	709 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	ANKRD34A	Q69YU3	496 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	PRPF40B	Q6NWY9	871 aa	Known RBP	8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	DEFB132	Q7Z7B7	95 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	RUSC1	Q9BVN2	902 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	PPP4R2	Q9NY27	417 aa		8.62	□□□□□ -1.03
HIPK1-210	ENST00000514621	MEGF11	A6BM72	1044 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	HSP90AB1	P08238	724 aa	Known RBP	8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	ITPKA	P23677	461 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	PTPN12	Q05209	780 aa	Known RBP	8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	AKAP4	Q5JQC9	854 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	C1orf141	Q5JVX7	400 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	MPRIP	Q6WCQ1	1025 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	ARMC10	Q8N2F6	343 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	EPS8L3	Q8TE67	593 aa	Known RBP	8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	SYTL4	Q96C24	671 aa	Predicted RBP	8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	PLEKHF1	Q96S99	279 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	USP26	Q9BXU7	913 aa		8.61	□□□□□ -1.03
HIPK1-210	ENST00000514621	SBF2	Q86WG5	1849 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	SART1	O43290	800 aa	Known RBP	8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	FST	P19883	344 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	WDR43	Q15061	677 aa	Known RBP eCLIP	8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	ZNF423	Q2M1K9	1284 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	FAM46A	Q96IP4	442 aa	Known RBP	8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	ASB16	Q96NS5	453 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	CAMKK2	Q96RR4	588 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	ZNF576	Q9H609	170 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	ABCB6	Q9NP58	842 aa		8.6	□□□□□ -1.03
HIPK1-210	ENST00000514621	NHS	Q6T4R5	1651 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	PNMA6F	A0A0J9YX94	578 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	LOC100289279	A0A1B0GTE1	492 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	TMEM238L	A0A1B0GVL6	79 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	ERVV-2	B6SEH9	535 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	PLSCR1	O15162	318 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	DHX15	O43143	795 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	CYP11A1	P05108	521 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	GRM2	Q14416	872 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	EZH2	Q15910	746 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	ENOX2	Q16206	610 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	ARTN	Q5T4W7	220 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	FDX2	Q6P4F2	183 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	PNISR	Q8TF01	805 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	PIGB	Q92521	554 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	UTP4	Q969X6	686 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	PNN	Q9H307	717 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	ZFYVE1	Q9HBF4	777 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	LGR6	Q9HBX8	967 aa		8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	KDM6A	O15550	1401 aa	Predicted RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	TNS1	Q9HBL0	1735 aa	Known RBP	8.59	□□□□□ -1.03
HIPK1-210	ENST00000514621	DOT1L	Q8TEK3	1739 aa		8.58	□□□□□ -1.04

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms