RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 USP17L5A8MUK1 530 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 FGBP02675 491 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 PTPREP23469 700 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 PTPN5P54829 565 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 FOXO4P98177 505 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 TCF15Q12870 199 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 RRP1BQ14684 758 aaKnown RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 SHROOM1Q2M3G4 852 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 EPHA10Q5JZY3 1008 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 RNF180Q86T96 592 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 VTI1AQ96AJ9 217 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 RALYQ9UKM9 306 aaKnown RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 PHF24Q9UPV7 400 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 SLC4A7Q9Y6M7 1214 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 MAP1BP46821 2468 aaKnown RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 H3BQ06 376 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 RARBP10826 455 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 ATP2A2P16615 1042 aaKnown RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 ADORA2AP29274 412 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 HOXA7P31268 230 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 CCL23P55773 120 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 BACE1P56817 501 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 CCNA1P78396 465 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 TMEM67Q5HYA8 995 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 PTCRAQ6ISU1 281 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 EP400NLQ6ZTU2 488 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 G2E3Q7L622 706 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 ANKRD33Q7Z3H0 272 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 C8orf58Q8NAV2 365 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 CNTNAP3BQ96NU0 1288 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 CNTNAP3Q9BZ76 1288 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 UBE2ZQ9H832 354 aaPredicted RBP4.11□□□□□ -1.75
CHD1-211ENST00000514344 MTUS1Q9ULD2 1270 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 TRIM35Q9UPQ4 493 aa4.11□□□□□ -1.75
CHD1-211ENST00000514344 ATAD5Q96QE3 1844 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 UMODL1Q5DID0 1318 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 POTEB3A0JP26 581 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 SLC15A5A6NIM6 579 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 H0Y858 1186 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ARHGEF15O94989 841 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 LDHBP07195 334 aaKnown RBP4.1□□□□□ -1.75
CHD1-211ENST00000514344 HOXC6P09630 235 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 CAP2P40123 477 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 IRX5P78411 483 aaPredicted RBP4.1□□□□□ -1.75
CHD1-211ENST00000514344 MAP3K10Q02779 954 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 GRB14Q14449 540 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 SH3D19Q5HYK7 790 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 CCDC30Q5VVM6 783 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 POTEBQ6S5H4 581 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ASCL5Q7RTU5 278 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ATOH1Q92858 354 aaPredicted RBP4.1□□□□□ -1.75
CHD1-211ENST00000514344 COL26A1Q96A83 441 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 TOX2Q96NM4 488 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 MYH16Q9H6N6 1097 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 AS3MTQ9HBK9 375 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 TLR9Q9NR96 1032 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 MUTYHQ9UIF7 546 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 SUGT1Q9Y2Z0 365 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 SPEGQ15772 3267 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ZNF292O60281 2723 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ZNF536O15090 1300 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ENTPD3O75355 529 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 SLC5A1P13866 664 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 ACLYP53396 1101 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 GRB10Q13322 594 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 METTL24Q5JXM2 366 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 TSPYL6Q8N831 410 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 GDPD5Q8WTR4 605 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 NUP133Q8WUM0 1156 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 MS4A3Q96HJ5 214 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 IL23AQ9NPF7 189 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 PCDHA11Q9Y5I1 949 aa4.1□□□□□ -1.75
CHD1-211ENST00000514344 COL4A6Q14031 1691 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 USP17L10C9JJH3 530 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 POU3F3P20264 500 aaPredicted RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 FKBP5Q13451 457 aaPredicted RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 COL9A2Q14055 689 aaPredicted RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 LRRC24Q50LG9 513 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 WDR66Q8TBY9 1149 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 PBXIP1Q96AQ6 731 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 CDCA7LQ96GN5 454 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 IDI2Q9BXS1 227 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 PCGF6Q9BYE7 350 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 OSBPL5Q9H0X9 879 aaPredicted RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 BTBD7Q9P203 1132 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 TRPC6Q9Y210 931 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 MYH13Q9UKX3 1938 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 COBLO75128 1261 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 CNMDO75829 334 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 GDF11O95390 407 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 TAL1P17542 331 aaPredicted RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 JAG1P78504 1218 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 TAP1Q03518 808 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 KCNA10Q16322 511 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 SUGP1Q8IWZ8 645 aaKnown RBP4.09□□□□□ -1.75
CHD1-211ENST00000514344 SCLYQ96I15 445 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 GLT1D1Q96MS3 346 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 STK31Q9BXU1 1019 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 HIPK3Q9H422 1215 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms