RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	MCMDC2	Q4G0Z9	681 aa		18.76	■□□□□ 0.59
SEC31A-238	ENST00000514326	VCPKMT	Q9H867	229 aa		18.76	■□□□□ 0.59
SEC31A-238	ENST00000514326	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	ADCY3	O60266	1144 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	ELN	P15502	786 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	SDS	P20132	328 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	MTFR1	Q15390	333 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	TANGO6	Q9C0B7	1094 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	PORCN	Q9H237	461 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	SH2D4A	Q9H788	454 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	BIN2	Q9UBW5	565 aa	Predicted RBP	18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	GJD2	Q9UKL4	321 aa		18.75	■□□□□ 0.59
SEC31A-238	ENST00000514326	MGAM	O43451	1857 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	EN2	P19622	333 aa	Predicted RBP	18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	CTDSPL2	Q05D32	466 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	IRF5	Q13568	498 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	TICAM2	Q86XR7	235 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	TMEM106C	Q9BVX2	250 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	INCENP	Q9NQS7	918 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	BTBD7	Q9P203	1132 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	RABGAP1	Q9Y3P9	1069 aa		18.74	■□□□□ 0.59
SEC31A-238	ENST00000514326	IGKV6D-41	A0A0C4DH26	115 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	COG2	Q14746	738 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	FAM47A	Q5JRC9	791 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	LBX2	Q6XYB7	198 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	SLAIN1	Q8ND83	568 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	LPAR1	Q92633	364 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	ZNF287	Q9HBT7	754 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	TACC3	Q9Y6A5	838 aa		18.73	■□□□□ 0.59
SEC31A-238	ENST00000514326	MYH8	P13535	1937 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	RAD21	O60216	631 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	FGA	P02671	866 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	SLC3A2	P08195	630 aa	Known RBP	18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	HSPD1	P10809	573 aa	Known RBP	18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	PDE4B	Q07343	736 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	ALX1	Q15699	326 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	CLIP2	Q9UDT6	1046 aa		18.72	■□□□□ 0.59
SEC31A-238	ENST00000514326	FLOT1	O75955	427 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	MAPK4	P31152	587 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	DSG3	P32926	999 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	TFAP4	Q01664	338 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	CCAR1	Q8IX12	1150 aa	Known RBP	18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	PXYLP1	Q8TE99	480 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	CEP95	Q96GE4	821 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	FBXO28	Q9NVF7	368 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	HOXC10	Q9NYD6	342 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	NYAP2	Q9P242	653 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	CCDC171	Q6TFL3	1326 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	BRCA2	P51587	3418 aa		18.71	■□□□□ 0.59
SEC31A-238	ENST00000514326	WDR46	O15213	610 aa	Known RBP	18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	INHA	P05111	366 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	CCL5	P13501	91 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	GSPT1	P15170	499 aa	Known RBP	18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	UBXN2A	P68543	259 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	FAM83B	Q5T0W9	1011 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	CWC27	Q6UX04	472 aa	Known RBP	18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	GPR142	Q7Z601	462 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	PLEKHH3	Q7Z736	793 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	NEDD1	Q8NHV4	660 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	ATG4C	Q96DT6	458 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	NUP88	Q99567	741 aa	Predicted RBP	18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	GOPC	Q9HD26	462 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	DIAPH3	Q9NSV4	1193 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	MTMR4	Q9NYA4	1195 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	ANAPC4	Q9UJX5	808 aa		18.7	■□□□□ 0.58
SEC31A-238	ENST00000514326	DOCK3	Q8IZD9	2030 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326		F5H6K3	240 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	TSPY3	P0CV98	308 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	TSPY8	P0CW00	308 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	CYP2B6	P20813	491 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	KLRC3	Q07444	240 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	TTC22	Q5TAA0	569 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	WDR78	Q5VTH9	848 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	UNC93B1	Q9H1C4	597 aa		18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	KIAA0100	Q14667	2235 aa	Known RBP	18.69	■□□□□ 0.58
SEC31A-238	ENST00000514326	GREB1L	Q9C091	1923 aa	Predicted RBP	18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	NDUFB10	O96000	172 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	HAND2	P61296	217 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	CCNA1	P78396	465 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	TRIM32	Q13049	653 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	MORN1	Q5T089	497 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	LRRC47	Q8N1G4	583 aa	Known RBP	18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	USP6NL	Q92738	828 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	NUDT12	Q9BQG2	462 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	RNF208	Q9H0X6	261 aa		18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	CWC22	Q9HCG8	908 aa	Known RBP	18.68	■□□□□ 0.58
SEC31A-238	ENST00000514326	TNRC18	O15417	2968 aa	Predicted RBP	18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	TTLL1	O95922	423 aa		18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	SOCS4	Q8WXH5	440 aa		18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	MKL1	Q969V6	931 aa		18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	SPATC1L	Q9H0A9	340 aa		18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	PLIN4	Q96Q06	1357 aa		18.67	■□□□□ 0.58
SEC31A-238	ENST00000514326	TSPY2	A6NKD2	308 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms