RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
CDK7-210ENST00000513629 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.42□□□□□ -0.58
CDK7-210ENST00000513629 ZHX2Q9Y6X8 837 aa11.42□□□□□ -0.58
CDK7-210ENST00000513629 DOCK1Q14185 1865 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 GPR75-ASB3A0A0A6YYF3 556 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
CDK7-210ENST00000513629 FAM196BA6NMK8 535 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 CXCL11O14625 94 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 PTPRAP18433 802 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
CDK7-210ENST00000513629 G3BP1Q13283 466 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDK7-210ENST00000513629 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
CDK7-210ENST00000513629 TMEM57Q8N5G2 664 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 RAI14Q9P0K7 980 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 MAP10Q9P2G4 905 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
CDK7-210ENST00000513629 MYPNQ86TC9 1320 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 RAD21O60216 631 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 MCAMP43121 646 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 PRMT2P55345 433 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 GSTO1P78417 241 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 ZKSCAN2Q63HK3 967 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 GADL1Q6ZQY3 521 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 CCDC84Q86UT8 332 aaPredicted RBP11.4□□□□□ -0.58
CDK7-210ENST00000513629 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
CDK7-210ENST00000513629 GDPD2Q9HCC8 539 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 SRRDQ9UH36 339 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
CDK7-210ENST00000513629 A6NJR5 290 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 CTNND1O60716 968 aaKnown RBP11.39□□□□□ -0.59
CDK7-210ENST00000513629 BCRP11274 1271 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 HOXD10P28358 340 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 FCGRTP55899 365 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 PRKCZQ05513 592 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 MTFR1Q15390 333 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 FASTKD5Q7L8L6 764 aaKnown RBP11.39□□□□□ -0.59
CDK7-210ENST00000513629 RAET1EQ8TD07 263 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
CDK7-210ENST00000513629 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 GPR37L1O60883 481 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 LDHCP07864 332 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 UQCRFS1P1P0C7P4 283 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 CTHP32929 405 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDK7-210ENST00000513629 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 TNNI3KQ59H18 835 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 TTC39AQ5SRH9 613 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 SMCR8Q8TEV9 937 aaPredicted RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDK7-210ENST00000513629 PRM3Q9NNZ6 103 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 FCF1Q9Y324 198 aaKnown RBP11.38□□□□□ -0.59
CDK7-210ENST00000513629 FPGT-TNNI3KV9GXZ4 949 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 PTPRFP10586 1907 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 MAST2Q6P0Q8 1798 aa11.38□□□□□ -0.59
CDK7-210ENST00000513629 PHIPQ8WWQ0 1821 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 GRK4P32298 578 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 ITPRIPQ8IWB1 547 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
CDK7-210ENST00000513629 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
CDK7-210ENST00000513629 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDK7-210ENST00000513629 AGTPBP1Q9UPW5 1226 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 SLC45A1Q9Y2W3 748 aa11.37□□□□□ -0.59
CDK7-210ENST00000513629 RNF223E7ERA6 249 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 SURF6O75683 361 aaKnown RBP11.36□□□□□ -0.59
CDK7-210ENST00000513629 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
CDK7-210ENST00000513629 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 TREML2Q5T2D2 321 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
CDK7-210ENST00000513629 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
CDK7-210ENST00000513629 GABRQQ9UN88 632 aa11.36□□□□□ -0.59
CDK7-210ENST00000513629 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
CDK7-210ENST00000513629 TNPO2O14787 897 aaKnown RBP11.35□□□□□ -0.59
CDK7-210ENST00000513629 RLBP1P12271 317 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 CCL5P13501 91 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 ABL2P42684 1182 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 SPP2Q13103 211 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 RRP1BQ14684 758 aaKnown RBP11.35□□□□□ -0.59
CDK7-210ENST00000513629 HABP4Q5JVS0 413 aaKnown RBP11.35□□□□□ -0.59
CDK7-210ENST00000513629 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 TLR7Q9NYK1 1049 aaKnown RBP11.35□□□□□ -0.59
CDK7-210ENST00000513629 CEP290O15078 2479 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
CDK7-210ENST00000513629 FLT1P17948 1338 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms