RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
SPCS3-204ENST00000513139 TRIM60Q495X7 471 aa17.01■□□□□ 0.31
SPCS3-204ENST00000513139 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
SPCS3-204ENST00000513139 MYH8P13535 1937 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 ADORA2AP29274 412 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 RAB3GAP1Q15042 981 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
SPCS3-204ENST00000513139 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 RPAP3Q9H6T3 665 aaPredicted RBP17■□□□□ 0.31
SPCS3-204ENST00000513139 SLC5A4Q9NY91 659 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 PARP14Q460N5 1801 aa17■□□□□ 0.31
SPCS3-204ENST00000513139 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 TRIM43BA6NCK2 446 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 GNAI2P04899 355 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 VASPP50552 380 aaPredicted RBP16.99■□□□□ 0.31
SPCS3-204ENST00000513139 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
SPCS3-204ENST00000513139 COG2Q14746 738 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 ACER1Q8TDN7 264 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 TRIM43Q96BQ3 446 aaPredicted RBP16.99■□□□□ 0.31
SPCS3-204ENST00000513139 MOV10L1Q9BXT6 1211 aaKnown RBP16.99■□□□□ 0.31
SPCS3-204ENST00000513139 CABP5Q9NP86 173 aa16.99■□□□□ 0.31
SPCS3-204ENST00000513139 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 CYP7A1P22680 504 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 LRRC41Q15345 812 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
SPCS3-204ENST00000513139 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 ABRAQ8N0Z2 381 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
SPCS3-204ENST00000513139 USP5P45974 858 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 TLE2Q04725 743 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 ANO1Q5XXA6 986 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 MB21D1Q8N884 522 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
SPCS3-204ENST00000513139 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
SPCS3-204ENST00000513139 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 COL11A1P12107 1806 aaPredicted RBP16.97■□□□□ 0.31
SPCS3-204ENST00000513139 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
SPCS3-204ENST00000513139 KIAA0355O15063 1070 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 COBLO75128 1261 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 CLTBP09497 229 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 ERCC3P19447 782 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 ZAP70P43403 619 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
SPCS3-204ENST00000513139 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 MROH8Q9H579 483 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.31
SPCS3-204ENST00000513139 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
SPCS3-204ENST00000513139 TNFRSF10AO00220 468 aa16.95■□□□□ 0.3
SPCS3-204ENST00000513139 ITGB8P26012 769 aa16.95■□□□□ 0.3
SPCS3-204ENST00000513139 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
SPCS3-204ENST00000513139 SHMT1P34896 483 aa16.95■□□□□ 0.3
SPCS3-204ENST00000513139 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.94■□□□□ 0.3
SPCS3-204ENST00000513139 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.94■□□□□ 0.3
SPCS3-204ENST00000513139 COL9A1P20849 921 aa16.94■□□□□ 0.3
SPCS3-204ENST00000513139 FAM47AQ5JRC9 791 aa16.94■□□□□ 0.3
SPCS3-204ENST00000513139 PRAMEF19Q5SWL8 479 aa16.94■□□□□ 0.3
SPCS3-204ENST00000513139 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
SPCS3-204ENST00000513139 MAML3Q96JK9 1138 aa16.94■□□□□ 0.3
SPCS3-204ENST00000513139 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
SPCS3-204ENST00000513139 RARBP10826 455 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 RAG1P15918 1043 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 DNAJB2P25686 324 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 EPHB4P54760 987 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 FPGSQ05932 587 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 GRIN2CQ14957 1233 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 SEPT2Q15019 361 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 RNF180Q86T96 592 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 XPNPEP3Q9NQH7 507 aa16.93■□□□□ 0.3
SPCS3-204ENST00000513139 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 A0A1W2PRG0 241 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
SPCS3-204ENST00000513139 FCER1AP12319 257 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 PLCD1P51178 756 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 GABPAQ06546 454 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 MAGEB6Q8N7X4 407 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 USP38Q8NB14 1042 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 TOX2Q96NM4 488 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 ZNF576Q9H609 170 aa16.92■□□□□ 0.3
SPCS3-204ENST00000513139 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
SPCS3-204ENST00000513139 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
SPCS3-204ENST00000513139 ANKRD33Q7Z3H0 272 aa16.91■□□□□ 0.3
SPCS3-204ENST00000513139 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
SPCS3-204ENST00000513139 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
SPCS3-204ENST00000513139 ATXN2LQ8WWM7 1075 aaKnown RBP16.91■□□□□ 0.3
SPCS3-204ENST00000513139 TMEM39AQ9NV64 488 aa16.91■□□□□ 0.3
SPCS3-204ENST00000513139 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
SPCS3-204ENST00000513139 A0A1W2PQ45 241 aaPredicted RBP16.9■□□□□ 0.3
SPCS3-204ENST00000513139 A0A1W2PQY0 241 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms