RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 HMMRO75330 724 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 CFHP08603 1231 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 ADORA1P30542 326 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 PICALMQ13492 652 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 HSP90AB4PQ58FF6 505 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
SDHC-208ENST00000513009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.15□□□□□ -0.78
SDHC-208ENST00000513009 COPRSQ9NQ92 184 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 MTMR10Q9NXD2 777 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
SDHC-208ENST00000513009 ABCF2Q9UG63 623 aa10.15□□□□□ -0.78
SDHC-208ENST00000513009 XRCC5P13010 732 aaKnown RBP10.14□□□□□ -0.79
SDHC-208ENST00000513009 CAP2P40123 477 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 HMGCS2P54868 508 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 TRIM32Q13049 653 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 Q7L0L9 218 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 TRIB2Q92519 343 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 CUL9Q8IWT3 2517 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 SIPA1L1O43166 1804 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 FRMPD3Q5JV73 1810 aa10.14□□□□□ -0.79
SDHC-208ENST00000513009 PFASO15067 1338 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 FAM196BA6NMK8 535 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 SURF6O75683 361 aaKnown RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 LDHCP07864 332 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 COL6A1P12109 1028 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 SYN1P17600 705 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 HOXA7P31268 230 aaPredicted RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 MECOMQ03112 1051 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 MTX1Q13505 466 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 PDE3AQ14432 1141 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 MVPQ14764 893 aaKnown RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 ERICH6Q7L0X2 663 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
SDHC-208ENST00000513009 TRMT44Q8IYL2 757 aaKnown RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 ZNF384Q8TF68 577 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 SOCS4Q8WXH5 440 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 WDR18Q9BV38 432 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 UBE2OQ9C0C9 1292 aaKnown RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 AS3MTQ9HBK9 375 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 HERC5Q9UII4 1024 aaKnown RBP10.13□□□□□ -0.79
SDHC-208ENST00000513009 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
SDHC-208ENST00000513009 FOCADQ5VW36 1801 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 TIMM10P62072 90 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 GSTO1P78417 241 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 RRP1BQ14684 758 aaKnown RBP10.12□□□□□ -0.79
SDHC-208ENST00000513009 CCDC158Q5M9N0 1113 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 FAM109BQ6ICB4 259 aaPredicted RBP10.12□□□□□ -0.79
SDHC-208ENST00000513009 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
SDHC-208ENST00000513009 PANK1Q8TE04 598 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 XAGE2Q96GT9 111 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
SDHC-208ENST00000513009 PA2G4Q9UQ80 394 aaKnown RBP10.12□□□□□ -0.79
SDHC-208ENST00000513009 CDK5RAP2Q96SN8 1893 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 COL6A3P12111 3177 aa10.12□□□□□ -0.79
SDHC-208ENST00000513009 CYP2B6P20813 491 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 MAPK4P31152 587 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 BACE1P56817 501 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 IRX3P78415 501 aaPredicted RBP10.11□□□□□ -0.79
SDHC-208ENST00000513009 GPRC5AQ8NFJ5 357 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 USP6NLQ92738 828 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
SDHC-208ENST00000513009 GINM1Q9NU53 330 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 TNNQ9UQP3 1299 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
SDHC-208ENST00000513009 C19orf81C9J6K1 198 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 ASNSP08243 561 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 ZKSCAN1P17029 563 aaPredicted RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 HERVK_113P62684 666 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 CACNB2Q08289 660 aaPredicted RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 TFCP2Q12800 502 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 MAP2K5Q13163 448 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 MTMR2Q13614 643 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 METTL16Q86W50 562 aaKnown RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 SPATA5Q8NB90 893 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 GTF3C2Q8WUA4 911 aaPredicted RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 P2RX7Q99572 595 aaKnown RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 IRX2Q9BZI1 471 aaPredicted RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
SDHC-208ENST00000513009 TXNRD2Q9NNW7 524 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 HMG20BQ9P0W2 317 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 PI4KBQ9UBF8 816 aa10.1□□□□□ -0.79
SDHC-208ENST00000513009 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
SDHC-208ENST00000513009 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
SDHC-208ENST00000513009 RGS2P41220 211 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 LRRC26Q2I0M4 334 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 MORN1Q5T089 497 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms