RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 UBXN2AP68543 259 aa14.44□□□□□ -0.1
CDK7-208ENST00000512687 TRIM32Q13049 653 aa14.44□□□□□ -0.1
CDK7-208ENST00000512687 HDAC1Q13547 482 aaPredicted RBP14.44□□□□□ -0.1
CDK7-208ENST00000512687 GPRC5AQ8NFJ5 357 aa14.44□□□□□ -0.1
CDK7-208ENST00000512687 SEC62Q99442 399 aaKnown RBP14.44□□□□□ -0.1
CDK7-208ENST00000512687 RNF208Q9H0X6 261 aa14.44□□□□□ -0.1
CDK7-208ENST00000512687 ARPP21Q9UBL0 812 aaPredicted RBP14.44□□□□□ -0.1
CDK7-208ENST00000512687 ERC2O15083 957 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
CDK7-208ENST00000512687 GJB1P08034 283 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 GJA8P48165 433 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 ICA1Q05084 483 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 ANKRD45Q5TZF3 282 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 GTF3C2Q8WUA4 911 aaPredicted RBP14.43□□□□□ -0.1
CDK7-208ENST00000512687 TRIB2Q92519 343 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 BTBD7Q9P203 1132 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
CDK7-208ENST00000512687 ZFYP08048 801 aaPredicted RBP14.42□□□□□ -0.1
CDK7-208ENST00000512687 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 LBX2Q6XYB7 198 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 UBE2Q1Q7Z7E8 422 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 DDRGK1Q96HY6 314 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDK7-208ENST00000512687 RABGAP1Q9Y3P9 1069 aa14.42□□□□□ -0.1
CDK7-208ENST00000512687 CYP2B6P20813 491 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 RASA1P20936 1047 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 MAPK4P31152 587 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 ZMYM1Q5SVZ6 1142 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 GIMAP6Q6P9H5 292 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 U2AF1L4Q8WU68 220 aaKnown RBP14.41□□□□□ -0.1
CDK7-208ENST00000512687 USP6NLQ92738 828 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 GCC1Q96CN9 775 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 CCDC17Q96LX7 622 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 FSD1Q9BTV5 496 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 PAK6Q9NQU5 681 aaPredicted RBP14.41□□□□□ -0.1
CDK7-208ENST00000512687 TMX2Q9Y320 296 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 CEP290O15078 2479 aa14.41□□□□□ -0.1
CDK7-208ENST00000512687 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 FOXP2O15409 715 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 HMGCRP04035 888 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
CDK7-208ENST00000512687 PDE1AP54750 535 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 CCL14Q16627 93 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 MORN1Q5T089 497 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 CCDC129Q6ZRS4 1044 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 PLEKHH3Q7Z736 793 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 SPICE1Q8N0Z3 855 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 NUDT12Q9BQG2 462 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDK7-208ENST00000512687 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
CDK7-208ENST00000512687 SGPL1O95470 568 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 TDO2P48775 406 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 NKX2-3Q8TAU0 364 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 SOCS4Q8WXH5 440 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 DEFB118Q96PH6 123 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 MCM3APO60318 1980 aa14.39□□□□□ -0.11
CDK7-208ENST00000512687 PATL2C9JE40 543 aaKnown RBP14.38□□□□□ -0.11
CDK7-208ENST00000512687 IGHDP01880 384 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 GNAT2P19087 354 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 LPAR1Q92633 364 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 ATG4CQ96DT6 458 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 CRISPLD2Q9H0B8 497 aa14.38□□□□□ -0.11
CDK7-208ENST00000512687 SMCHD1A6NHR9 2005 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 WDR46O15213 610 aaKnown RBP14.37□□□□□ -0.11
CDK7-208ENST00000512687 PRDM1O75626 825 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
CDK7-208ENST00000512687 XRCC5P13010 732 aaKnown RBP14.37□□□□□ -0.11
CDK7-208ENST00000512687 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 COG2Q14746 738 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 MAP3K21Q5TCX8 1036 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 SMC5Q8IY18 1101 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 APBA2Q99767 749 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 MOV10L1Q9BXT6 1211 aaKnown RBP14.37□□□□□ -0.11
CDK7-208ENST00000512687 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 KANSL2Q9H9L4 492 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 FBXO28Q9NVF7 368 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 FLRT1Q9NZU1 646 aa14.37□□□□□ -0.11
CDK7-208ENST00000512687 PLIN4Q96Q06 1357 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 FLOT1O75955 427 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 APPP05067 770 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
CDK7-208ENST00000512687 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
CDK7-208ENST00000512687 PTPREP23469 700 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 RGS2P41220 211 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 CCNA1P78396 465 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 CACNB2Q08289 660 aaPredicted RBP14.36□□□□□ -0.11
CDK7-208ENST00000512687 AAMPQ13685 434 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 GRB14Q14449 540 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 LRRFIP1Q32MZ4 808 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms