RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 TRBV23-1A0A0A0MS06 115 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 POTEB3A0JP26 581 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 UPK3BL1B0FP48 263 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 UPK3BL2E5RIL1 263 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 UBAP1LF5GYI3 381 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 AGRPO00253 132 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 EREGO14944 169 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 SUSD5O60279 629 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TLR5O60602 858 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 KPNA6O60684 536 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 VAMP4O75379 141 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 DNAJC8O75937 253 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 ASGR2P07307 311 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 IFIT1P09914 478 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 CHKAP35790 457 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 PIK3CAP42336 1068 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 GRK6P43250 576 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 RECQLP46063 649 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 MMP16P51512 607 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 ALDH5A1P51649 535 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 SFSWAPQ12872 951 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 GRB10Q13322 594 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TLR1Q15399 786 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 SEPT7Q16181 437 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 LINC01559Q495D7 138 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 INTS6LQ5JSJ4 861 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 FAM209AQ5JX71 171 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 AGAP9Q5VTM2 703 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 IQSEC1Q6DN90 963 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 PTCRAQ6ISU1 281 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 VHLLQ6RSH7 139 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 POTEBQ6S5H4 581 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 RUFY4Q6ZNE9 571 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CYP2U1Q7Z449 544 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 UBE2Q1Q7Z7E8 422 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CATIPQ7Z7H3 387 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CCDC84Q86UT8 332 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 TRIM42Q8IWZ5 723 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TRMT44Q8IYL2 757 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 OTUD6BQ8N6M0 293 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 NKAIN3Q8N8D7 197 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 OR2W6PQ8NHA6 318 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 BAP1Q92560 729 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 JARID2Q92833 1246 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 FUBP3Q96I24 572 aaKnown RBP eCLIP3.93□□□□□ -1.789e-9■■■■■ 53.3
PVT1-202ENST00000512617 YTHDC1Q96MU7 727 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 AIFM3Q96NN9 605 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 ZBED2Q9BTP6 218 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 ISCA1Q9BUE6 129 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CRB3Q9BUF7 120 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 MENTQ9BUN1 341 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 C1QTNF2Q9BXJ5 285 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 NAA15Q9BXJ9 866 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 SLC13A1Q9BZW2 595 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CHMP4BQ9H444 224 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 ELP3Q9H9T3 547 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 C1orf112Q9NSG2 853 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 CABP1Q9NZU7 370 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TMEM63CQ9P1W3 806 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 SUCOQ9UBS9 1254 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TPCN1Q9ULQ1 816 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TMCC3Q9ULS5 477 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 COLQQ9Y215 455 aaPredicted RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 LRRFIP2Q9Y608 721 aaKnown RBP3.93□□□□□ -1.78
PVT1-202ENST00000512617 USP3Q9Y6I4 520 aa3.93□□□□□ -1.78
PVT1-202ENST00000512617 TRAV20A0A0B4J274 112 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 A0A1B0GVC2 190 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 GTPBP10A4D1E9 387 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 FAM83GA6ND36 823 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 NEMP1O14524 444 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 RIMBP2O15034 1052 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 OPA1O60313 960 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZEB2O60315 1214 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 PPFIA3O75145 1194 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 PRKD3O94806 890 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 CNOT4O95628 575 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 MT-CO1P00395 513 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 GNRH1P01148 92 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 LTFP02788 710 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 HSPA6P17066 643 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 VCAM1P19320 739 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 POU3F2P20265 443 aaPredicted RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 CAPN3P20807 821 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 FLT3P36888 993 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 STT3AP46977 705 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZNF131P52739 623 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 PSMC1P62191 440 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 RPS26P62854 115 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 APBA1Q02410 837 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 G3BP1Q13283 466 aaKnown RBP eCLIP3.92□□□□□ -1.78
PVT1-202ENST00000512617 TUBB8Q3ZCM7 444 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 TMEM240Q5SV17 173 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 INTS11Q5TA45 600 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 RC3H1Q5TC82 1133 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 VPS53Q5VIR6 699 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 DUSP27Q5VZP5 1158 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 LMBRD2Q68DH5 695 aaPredicted RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 C4orf50Q6ZRC1 276 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 REC114Q7Z4M0 266 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms