RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 UTYO14607 1347 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 AKR1B10O60218 316 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 TECP42680 631 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 TMEM232C9JQI7 657 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 PDE4DQ08499 809 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 UBE4AQ14139 1066 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 ERCC6LQ2NKX8 1250 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 CCDC148Q8NFR7 591 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 PSMA7O14818 248 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 CALML3P27482 149 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 CASP7P55210 303 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 SPICE1Q8N0Z3 855 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 WDR66Q8TBY9 1149 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 GDAP1L1Q96MZ0 367 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 CT47A1Q5JQC4 288 aaPredicted RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
PRDM16-207ENST00000512462 SMARCC2Q8TAQ2 1214 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 DCCP43146 1447 aa13.48□□□□□ -0.25
PRDM16-207ENST00000512462 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 USP8P40818 1118 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SNAP25P60880 206 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 MACROD2A1Z1Q3 448 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 APBA3O96018 575 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 MMP1P03956 469 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SCG2P13521 617 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SPA17Q15506 151 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 COA7Q96BR5 231 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 FAM84BQ96KN1 310 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 RUFY1Q96T51 708 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 PP2D1A8MPX8 630 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-207ENST00000512462 NFIXQ14938 502 aa13.47□□□□□ -0.25
PRDM16-207ENST00000512462 COL15A1P39059 1388 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 IFNAR1P17181 557 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 GNAQP50148 359 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 WDR78Q5VTH9 848 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 KCNF1Q9H3M0 494 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
PRDM16-207ENST00000512462 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.25
PRDM16-207ENST00000512462 ADAMTS7Q9UKP4 1686 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
PRDM16-207ENST00000512462 KRT9P35527 623 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 RAB34Q9BZG1 259 aa13.46□□□□□ -0.25
PRDM16-207ENST00000512462 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.26
PRDM16-207ENST00000512462 SERPINB2P05120 415 aa13.46□□□□□ -0.26
PRDM16-207ENST00000512462 CSF1RP07333 972 aa13.46□□□□□ -0.26
PRDM16-207ENST00000512462 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.26
PRDM16-207ENST00000512462 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.26
PRDM16-207ENST00000512462 TCHHQ07283 1943 aa13.46□□□□□ -0.26
PRDM16-207ENST00000512462 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 KCTD1Q719H9 257 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 CNPY4Q8N129 248 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 KIF2AO00139 706 aaPredicted RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 CCDC175P0C221 793 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 EVX2Q03828 476 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 SRRTQ9BXP5 876 aaKnown RBP13.45□□□□□ -0.26
PRDM16-207ENST00000512462 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
PRDM16-207ENST00000512462 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 PRKG1Q13976 671 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 KRT79Q5XKE5 535 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 UBXN2AP68543 259 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms