RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 ATL3Q6DD88 541 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 PAXIP1Q6ZW49 1069 aaPredicted RBP15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 FLAD1Q8NFF5 587 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 RABGGTAQ92696 567 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 GOLGA1Q92805 767 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 EXOC4Q96A65 974 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 AGXT2Q9BYV1 514 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.12
SNCAIP-217ENST00000512385 XDHP47989 1333 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 CCP110O43303 1012 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 MAP3K12Q12852 859 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 DIXDC1Q155Q3 683 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 TBC1D16Q8TBP0 767 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 AIDAQ96BJ3 306 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 HPS5Q9UPZ3 1129 aa15.77■□□□□ 0.11
SNCAIP-217ENST00000512385 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 IRS2Q9Y4H2 1338 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 MAP2K7O14733 419 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 HMGB1P09429 215 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 TPM1P09493 284 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 CHMP4BP1P59074 171 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 KIF23Q02241 960 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 BEND6Q5SZJ8 279 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 LAMA4Q16363 1823 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 YEATS4O95619 227 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 TUBB4AP04350 444 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 GRIN1Q05586 938 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
SNCAIP-217ENST00000512385 COBLO75128 1261 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 PHKBQ93100 1093 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 GNL3LQ9NVN8 582 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 CYP2D7A0A087X1C5 515 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 F8W031 263 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 CPLX1O14810 134 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 GDAP1L1Q96MZ0 367 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 MED15Q96RN5 788 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 STRBPQ96SI9 672 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 EPB41L4AQ9HCS5 686 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 NFE2L3Q9Y4A8 694 aa15.75■□□□□ 0.11
SNCAIP-217ENST00000512385 TEX33O43247 280 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 BBOX1O75936 387 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 MECOMQ03112 1051 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 AATFQ9NY61 560 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 CCDC151A5D8V7 595 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 CBFA2T2O43439 604 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 CUTAO60888 179 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 VSNL1P62760 191 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 TBX2Q13207 712 aaPredicted RBP15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 RAD9BQ6WBX8 426 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 LEKR1Q6ZMV7 388 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 TACC3Q9Y6A5 838 aa15.74■□□□□ 0.11
SNCAIP-217ENST00000512385 A0A1B0GUL6 1792 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 PRC1O43663 620 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 CTDSPL2Q05D32 466 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 UBE3CQ15386 1083 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 HINFPQ9BQA5 517 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 SENP2Q9HC62 589 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 NPR1P16066 1061 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 PDE6BP35913 854 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 DRC1Q96MC2 740 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
SNCAIP-217ENST00000512385 EIF3CLB5ME19 914 aaKnown RBP15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 H0YIN7 160 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 C21orf2O43822 256 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 GTF2A1P52655 376 aaPredicted RBP15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 ANTXR2P58335 489 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 ZNF569Q5MCW4 686 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 SPECC1LQ69YQ0 1117 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 EIF3CQ99613 913 aaKnown RBP15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 DSCC1Q9BVC3 393 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 RABEP2Q9H5N1 569 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 SLC4A4Q9Y6R1 1079 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 E2F4Q16254 413 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 JAKMIP3Q5VZ66 844 aa15.72■□□□□ 0.11
SNCAIP-217ENST00000512385 SRGAP1Q7Z6B7 1085 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms