RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 HAND2P61296 217 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 TFAP4Q01664 338 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 KIAA1755Q5JYT7 1200 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 SKAP1Q86WV1 359 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 GOPCQ9HD26 462 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 INCENPQ9NQS7 918 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 PTCH2Q9Y6C5 1203 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 MGAMO43451 1857 aa18.88■□□□□ 0.61
DDX41-214ENST00000512334 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 TNPO2O14787 897 aaKnown RBP18.87■□□□□ 0.61
DDX41-214ENST00000512334 PEX10O60683 326 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 PRMT2P55345 433 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 RRP12Q5JTH9 1297 aaKnown RBP18.87■□□□□ 0.61
DDX41-214ENST00000512334 MYPNQ86TC9 1320 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 CLIP2Q9UDT6 1046 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 SRRDQ9UH36 339 aa18.87■□□□□ 0.61
DDX41-214ENST00000512334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
DDX41-214ENST00000512334 IGKV6D-41A0A0C4DH26 115 aa18.86■□□□□ 0.61
DDX41-214ENST00000512334 RANBP6O60518 1105 aaKnown RBP18.86■□□□□ 0.61
DDX41-214ENST00000512334 CHMLP26374 656 aa18.86■□□□□ 0.61
DDX41-214ENST00000512334 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
DDX41-214ENST00000512334 CCAR1Q8IX12 1150 aaKnown RBP18.86■□□□□ 0.61
DDX41-214ENST00000512334 NEDD1Q8NHV4 660 aa18.86■□□□□ 0.61
DDX41-214ENST00000512334 TXNRD2Q9NNW7 524 aa18.86■□□□□ 0.61
DDX41-214ENST00000512334 PLIN4Q96Q06 1357 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 RAD50Q92878 1312 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 WDR46O15213 610 aaKnown RBP18.85■□□□□ 0.61
DDX41-214ENST00000512334 PRKCZQ05513 592 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 COA7Q96BR5 231 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 DSCC1Q9BVC3 393 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 IL25Q9H293 177 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 MTMR4Q9NYA4 1195 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 RBPJLQ9UBG7 517 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 MORF4L1Q9UBU8 362 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 TACC3Q9Y6A5 838 aa18.85■□□□□ 0.61
DDX41-214ENST00000512334 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 SPDYE16A6NNV3 312 aaPredicted RBP18.84■□□□□ 0.61
DDX41-214ENST00000512334 ZNF213O14771 459 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 ORC4O43929 436 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 FLOT1O75955 427 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 TTLL1O95922 423 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 ERVK-9P63128 1117 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 ERVK-24P63145 666 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 COG2Q14746 738 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 LRRC47Q8N1G4 583 aaKnown RBP18.84■□□□□ 0.61
DDX41-214ENST00000512334 GABRQQ9UN88 632 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 RABGAP1Q9Y3P9 1069 aa18.84■□□□□ 0.61
DDX41-214ENST00000512334 Q3C1V9 767 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 AKNAD1Q5T1N1 836 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 RNF41Q9H4P4 317 aaPredicted RBP18.83■□□□□ 0.6
DDX41-214ENST00000512334 CWC22Q9HCG8 908 aaKnown RBP18.83■□□□□ 0.6
DDX41-214ENST00000512334 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
DDX41-214ENST00000512334 F5H6K3 240 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 FGRP09769 529 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 SOX10P56693 466 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 KLRC3Q07444 240 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
DDX41-214ENST00000512334 PPP4R3BQ5MIZ7 849 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 FAM83BQ5T0W9 1011 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 NBPF11Q86T75 865 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 TBC1D10CQ8IV04 446 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 STAG1Q8WVM7 1258 aa18.82■□□□□ 0.6
DDX41-214ENST00000512334 NMT2O60551 498 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 CNMDO75829 334 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 NDUFB10O96000 172 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
DDX41-214ENST00000512334 DSG3P32926 999 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 FLT3LGP49771 235 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 CCNA1P78396 465 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 WDR78Q5VTH9 848 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 SH3TC2Q8TF17 1288 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 MKL1Q969V6 931 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 NUP88Q99567 741 aaPredicted RBP18.81■□□□□ 0.6
DDX41-214ENST00000512334 NBPF3Q9H094 633 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 BTBD7Q9P203 1132 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 ISY1Q9ULR0 285 aaKnown RBP18.81■□□□□ 0.6
DDX41-214ENST00000512334 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
DDX41-214ENST00000512334 MYCP01106 439 aaPredicted RBP18.8■□□□□ 0.6
DDX41-214ENST00000512334 MAPK4P31152 587 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 ARMC5Q96C12 935 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 ATG4CQ96DT6 458 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 PORCNQ9H237 461 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 FBXO28Q9NVF7 368 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 BIN2Q9UBW5 565 aaPredicted RBP18.8■□□□□ 0.6
DDX41-214ENST00000512334 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
DDX41-214ENST00000512334 DOCK3Q8IZD9 2030 aa18.79■□□□□ 0.6
DDX41-214ENST00000512334 NEDD4P46934 1319 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms