RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 CDC25BP30305 580 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 TECP42680 631 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 CCDC84Q86UT8 332 aaPredicted RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 TICAM2Q86XR7 235 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 KLHL7Q8IXQ5 586 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 ANKRD13CQ8N6S4 541 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 IL25Q9H293 177 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 GOLGA6AQ9NYA3 693 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 GLI2P10070 1586 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 H7C1W4 665 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 CHGBP05060 677 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 ADCY7P51828 1080 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 DYNLL1P63167 89 aaKnown RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 SP4Q02446 784 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 FAM98CQ17RN3 349 aaKnown RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 SYNE4Q8N205 404 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 CCDC51Q96ER9 411 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 TCHPQ9BT92 498 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 RASSF4Q9H2L5 321 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 EPN1Q9Y6I3 576 aaPredicted RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 CYP2D7A0A087X1C5 515 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 A0A1W2PRG0 241 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 GOLGA6BA6NDN3 693 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 KLRF2D3W0D1 207 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 CEP104O60308 925 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 SEC31AO94979 1220 aaKnown RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 HMGB2P26583 209 aaKnown RBP8.98□□□□□ -0.97
NEK1-208ENST00000512193 KLHL30Q0D2K2 578 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 NLRP10Q86W26 655 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 EYA3Q99504 573 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 INCENPQ9NQS7 918 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 RASAL2Q9UJF2 1139 aa8.98□□□□□ -0.97
NEK1-208ENST00000512193 SH2B2O14492 632 aaPredicted RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 GTPBP6O43824 516 aaPredicted RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 IFNAR1P17181 557 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 PRPHP41219 470 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 SLC1A4P43007 532 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 TCP10Q12799 353 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 NCAPH2Q6IBW4 605 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 CCDC91Q7Z6B0 441 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 LCORLQ8N3X6 602 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 PIH1D3Q9NQM4 214 aaKnown RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 ARHGAP31Q2M1Z3 1444 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 EPB41P11171 864 aaKnown RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 EEF2P13639 858 aaKnown RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 BRD3Q15059 726 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 FOXP1Q9H334 677 aaPredicted RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 ARPP21Q9UBL0 812 aaPredicted RBP8.97□□□□□ -0.97
NEK1-208ENST00000512193 PCDHB6Q9Y5E3 794 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 HECW2Q9P2P5 1572 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 H7C1D1 291 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 DNM2P50570 870 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 ASIC2Q16515 512 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 PTPROQ16827 1216 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 CCDC121Q6ZUS5 278 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 SLC35F6Q8N357 371 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 SLC39A2Q9NP94 309 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 MAN1B1Q9UKM7 699 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 TMEM94Q12767 1356 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 A2ML1A8K2U0 1454 aa8.97□□□□□ -0.97
NEK1-208ENST00000512193 FMNL1O95466 1100 aaPredicted RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 RPN1P04843 607 aaKnown RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 COPB1P53618 953 aaKnown RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 ZSCAN26Q16670 478 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 ABCA6Q8N139 1617 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 RNF26Q9BY78 433 aaPredicted RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 GOLPH3LQ9H4A5 285 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 ATP6V0A2Q9Y487 856 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 HEG1Q9ULI3 1381 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 ENC1O14682 589 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 TOM1O60784 492 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 MCAMP43121 646 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 GTF2A1P52655 376 aaPredicted RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 ZYXQ15942 572 aaKnown RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 TTC31Q49AM3 519 aaPredicted RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 USP37Q86T82 979 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 EPSTI1Q96J88 318 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 CCDC114Q96M63 670 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 GSDMAQ96QA5 445 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 CDCA7Q9BWT1 371 aaPredicted RBP8.96□□□□□ -0.97
NEK1-208ENST00000512193 ATG3Q9NT62 314 aa8.96□□□□□ -0.97
NEK1-208ENST00000512193 TULP4Q9NRJ4 1543 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 MMP1P03956 469 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 TNFAIP3P21580 790 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 ERCC5P28715 1186 aaPredicted RBP8.96□□□□□ -0.98
NEK1-208ENST00000512193 KCNQ4P56696 695 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 SF3A3Q12874 501 aaKnown RBP eCLIP8.96□□□□□ -0.986e-9■■■■■ 59.3
NEK1-208ENST00000512193 USH1GQ495M9 461 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 MFSD14BQ5SR56 506 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 RBM26Q5T8P6 1007 aaKnown RBP8.96□□□□□ -0.98
NEK1-208ENST00000512193 CEP57Q86XR8 500 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 TTLL11Q8NHH1 800 aa8.96□□□□□ -0.98
NEK1-208ENST00000512193 SPHKAPQ2M3C7 1700 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms