RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 MAD2L2Q9UI95 211 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 USP2O75604 605 aaPredicted RBP11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 CDKL5O76039 1030 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 ASNSP08243 561 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 PDHBP11177 359 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 ICA1Q05084 483 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 PKP1Q13835 747 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 RGS22Q8NE09 1264 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
PDGFRA-209ENST00000512143 STK36Q9NRP7 1315 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 USP17L5A8MUK1 530 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 CPLX1O14810 134 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 PLEKHA8P1O95397 391 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 FMNL1O95466 1100 aaPredicted RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 BRD1O95696 1058 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 SYT1P21579 422 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 SMARCA1P28370 1054 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 INPP5BP32019 993 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 KIF5BP33176 963 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 NUCB2P80303 420 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 SLC35G1Q2M3R5 365 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 CPLX2Q6PUV4 134 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 RASGRP2Q7LDG7 609 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 CTCFLQ8NI51 663 aaPredicted RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 BAZ2BQ9UIF8 2168 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-209ENST00000512143 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 PDCP20941 246 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 GNAQP50148 359 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 MAP3K11Q16584 847 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 SCYL3Q8IZE3 742 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 PHKBQ93100 1093 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 CDCA5Q96FF9 252 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 LZTS2Q9BRK4 669 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 GLIS2Q9BZE0 524 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 ORC3Q9UBD5 711 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 MTMR6Q9Y217 621 aa11.61□□□□□ -0.55
PDGFRA-209ENST00000512143 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 DOCK1Q14185 1865 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 F5H6K3 240 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 CYTH3O43739 400 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 STX6O43752 255 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 ECE1P42892 770 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 KLRC3Q07444 240 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 PKN1Q16512 942 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 WDR18Q9BV38 432 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 RIOX1Q9H6W3 641 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
PDGFRA-209ENST00000512143 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 KLRF2D3W0D1 207 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 DEXIO95424 95 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 NDUFB10O96000 172 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 PTPRAP18433 802 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 KIAA1755Q5JYT7 1200 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 SLFN13Q68D06 897 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 CLEC17AQ6ZS10 378 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 CCDC84Q86UT8 332 aaPredicted RBP11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 FAM184AQ8NB25 1140 aa11.59□□□□□ -0.55
PDGFRA-209ENST00000512143 ZKSCAN4Q969J2 545 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms