RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 PTPN12Q05209 780 aaKnown RBP8.48□□□□□ -1.05
COPS4-209ENST00000511653 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
COPS4-209ENST00000511653 ZBED3Q96IU2 234 aaPredicted RBP8.48□□□□□ -1.05
COPS4-209ENST00000511653 COA1Q9GZY4 146 aa8.48□□□□□ -1.05
COPS4-209ENST00000511653 EML1O00423 815 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 IGHMBP2P38935 993 aaKnown RBP8.47□□□□□ -1.05
COPS4-209ENST00000511653 CTSOP43234 321 aaPredicted RBP8.47□□□□□ -1.05
COPS4-209ENST00000511653 TM4SF4P48230 202 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 GCKRQ14397 625 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 TWISTNBQ3B726 338 aaPredicted RBP8.47□□□□□ -1.05
COPS4-209ENST00000511653 COX20Q5RI15 118 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 DNAJC14Q6Y2X3 702 aaPredicted RBP8.47□□□□□ -1.05
COPS4-209ENST00000511653 CERS5Q8N5B7 392 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 PLA2G12BQ9BX93 195 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 STK31Q9BXU1 1019 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 LEMD3Q9Y2U8 911 aa8.47□□□□□ -1.05
COPS4-209ENST00000511653 GPR25O00155 361 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.05
COPS4-209ENST00000511653 CHRNDQ07001 517 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 APOBEC3FQ8IUX4 373 aaKnown RBP8.46□□□□□ -1.05
COPS4-209ENST00000511653 COL26A1Q96A83 441 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.05
COPS4-209ENST00000511653 EGFL7Q9UHF1 273 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 HDAC9Q9UKV0 1011 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 LAMA3Q16787 3333 aa8.46□□□□□ -1.05
COPS4-209ENST00000511653 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.05
COPS4-209ENST00000511653 TNFRSF10BO14763 440 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 TAF5LO75529 589 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 CSF1RP07333 972 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 NF2P35240 595 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.06
COPS4-209ENST00000511653 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 CLMNQ96JQ2 1002 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 CD209Q9NNX6 404 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
COPS4-209ENST00000511653 JAG2Q9Y219 1238 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 ZSWIM8A7E2V4 1837 aa8.46□□□□□ -1.06
COPS4-209ENST00000511653 FANCIQ9NVI1 1328 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 BMP1P13497 986 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 NOS2P35228 1153 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 KCNJ4P48050 445 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 SREBF2Q12772 1141 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 TEAD4Q15561 434 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 DNAAF4Q8WXU2 420 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 ZSCAN10Q96SZ4 725 aaPredicted RBP8.45□□□□□ -1.06
COPS4-209ENST00000511653 MPHOSPH8Q99549 860 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 ANKRD2Q9GZV1 360 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 DEFB129Q9H1M3 183 aa8.45□□□□□ -1.06
COPS4-209ENST00000511653 MYH13Q9UKX3 1938 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 CLRN2A0PK11 232 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 F8W031 263 aaPredicted RBP8.44□□□□□ -1.06
COPS4-209ENST00000511653 IGF2BP3O00425 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
COPS4-209ENST00000511653 SPINT1O43278 529 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 MPSTP25325 297 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 TXLNAP40222 546 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
COPS4-209ENST00000511653 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 C6orf118Q5T5N4 469 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 FBXO46Q6PJ61 603 aaPredicted RBP8.44□□□□□ -1.06
COPS4-209ENST00000511653 GLYCTKQ8IVS8 523 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 HELQQ8TDG4 1101 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 CHMP4AQ9BY43 222 aa8.44□□□□□ -1.06
COPS4-209ENST00000511653 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 F6X3S4 739 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 FKTNO75072 461 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 FOXO4P98177 505 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 DLGAP5Q15398 846 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 CFAP100Q494V2 611 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 C16orf46Q6P387 395 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 LINS1Q8NG48 757 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 MYH16Q9H6N6 1097 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 IL16Q14005 1332 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 A0A0C4DFX4 3053 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 ANKRD18BA2A2Z9 1011 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 ZBTB39O15060 712 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 IL1R1P14778 569 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 MMP14P50281 582 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 CAP1Q01518 475 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 MAP3K11Q16584 847 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 NBPF12Q5TAG4 269 aaPredicted RBP8.43□□□□□ -1.06
COPS4-209ENST00000511653 PRMT6Q96LA8 375 aaPredicted RBP8.43□□□□□ -1.06
COPS4-209ENST00000511653 VEZTQ9HBM0 779 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
COPS4-209ENST00000511653 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
COPS4-209ENST00000511653 VAMP4O75379 141 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 PHKA2P46019 1235 aa8.42□□□□□ -1.06
COPS4-209ENST00000511653 RNF144AP50876 292 aaPredicted RBP8.42□□□□□ -1.06
COPS4-209ENST00000511653 BEND3Q5T5X7 828 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms