RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TMEM67Q5HYA8 995 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 PPP1R13LQ8WUF5 828 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 KIRREL1Q96J84 757 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 Q96M66 194 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 FERD3LQ96RJ6 166 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 SLC38A3Q99624 504 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHD1-207ENST00000511628 GOLGA2P5Q9HBQ8 144 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 FAM53CQ9NYF3 392 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 CTNND2Q9UQB3 1225 aa5.23□□□□□ -1.57
CHD1-207ENST00000511628 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 RGS13O14921 159 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 LRRN2O75325 713 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 CLEC3AO75596 197 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 YBX3P16989 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
CHD1-207ENST00000511628 GDNFP39905 211 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 CRKP46108 304 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 OVOS1Q6IE37 1185 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 OGFOD2Q6N063 350 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 TSPYL5Q86VY4 417 aaPredicted RBP5.22□□□□□ -1.57
CHD1-207ENST00000511628 KSR1Q8IVT5 923 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 REXO1Q8N1G1 1221 aaKnown RBP5.22□□□□□ -1.57
CHD1-207ENST00000511628 TMEM40Q8WWA1 233 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 DHX38Q92620 1227 aaKnown RBP5.22□□□□□ -1.57
CHD1-207ENST00000511628 NT5C1AQ9BXI3 368 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 GPR62Q9BZJ7 368 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 DUSP15Q9H1R2 295 aaPredicted RBP5.22□□□□□ -1.57
CHD1-207ENST00000511628 KCNQ5Q9NR82 932 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 METTL5Q9NRN9 209 aaKnown RBP5.22□□□□□ -1.57
CHD1-207ENST00000511628 TMEM59LQ9UK28 342 aa5.22□□□□□ -1.57
CHD1-207ENST00000511628 WASH4PA8MWX3 477 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 SCAMP3O14828 347 aaKnown RBP5.21□□□□□ -1.58
CHD1-207ENST00000511628 DNAJA2O60884 412 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 FARP2O94887 1054 aaPredicted RBP5.21□□□□□ -1.58
CHD1-207ENST00000511628 ATE1O95260 518 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 CLCQ05315 142 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 MLANAQ16655 118 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 NLRC3Q7RTR2 1065 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 MKRN2Q9H000 416 aaKnown RBP5.21□□□□□ -1.58
CHD1-207ENST00000511628 EHMT1Q9H9B1 1298 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 PCDHGB7Q9Y5F8 929 aa5.21□□□□□ -1.58
CHD1-207ENST00000511628 DNAJC25-GNG10A0A024R161 153 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 FAM86C2PA6NEL3 165 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 ESR1P03372 595 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 IMPDH2P12268 514 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 POLR2BP30876 1174 aaKnown RBP5.2□□□□□ -1.58
CHD1-207ENST00000511628 FANCCQ00597 558 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 NMIQ13287 307 aaPredicted RBP5.2□□□□□ -1.58
CHD1-207ENST00000511628 ZNF394Q53GI3 561 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 OXR1Q8N573 874 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 ABHD4Q8TB40 342 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 MYLIPQ8WY64 445 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 ATG4CQ96DT6 458 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 CRBNQ96SW2 442 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 ADAMTS10Q9H324 1103 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 FBXL21Q9UKT6 434 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 PCDHA11Q9Y5I1 949 aa5.2□□□□□ -1.58
CHD1-207ENST00000511628 RBAK-RBAKDNI3L0D1 243 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 GLI1P08151 1106 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 TCF3P15923 654 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 CCNFP41002 786 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 DUSP4Q13115 394 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 RALGPS1Q5JS13 557 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 ZNF648Q5T619 568 aaPredicted RBP5.19□□□□□ -1.58
CHD1-207ENST00000511628 FYB2Q5VWT5 728 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 SLITRK4Q8IW52 837 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 ZNF654Q8IZM8 581 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 EAF1Q96JC9 268 aaPredicted RBP5.19□□□□□ -1.58
CHD1-207ENST00000511628 ZNF512BQ96KM6 892 aaPredicted RBP5.19□□□□□ -1.58
CHD1-207ENST00000511628 DHRS1Q96LJ7 313 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 CNNM2Q9H8M5 875 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 ZMYM5Q9UJ78 669 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 CARMIL2Q6F5E8 1435 aa5.19□□□□□ -1.58
CHD1-207ENST00000511628 UBOX5O94941 541 aa5.18□□□□□ -1.58
CHD1-207ENST00000511628 NME1P15531 152 aaKnown RBP5.18□□□□□ -1.58
CHD1-207ENST00000511628 RPL10P27635 214 aaKnown RBP5.18□□□□□ -1.58
CHD1-207ENST00000511628 PCBP3P57721 371 aaKnown RBP5.18□□□□□ -1.58
CHD1-207ENST00000511628 GAB4Q2WGN9 574 aa5.18□□□□□ -1.58
CHD1-207ENST00000511628 CDCP2Q5VXM1 449 aa5.18□□□□□ -1.58
CHD1-207ENST00000511628 SPPL2CQ8IUH8 684 aa5.18□□□□□ -1.58
CHD1-207ENST00000511628 POU5F2Q8N7G0 328 aa5.18□□□□□ -1.58
CHD1-207ENST00000511628 ENOX1Q8TC92 643 aaKnown RBP5.18□□□□□ -1.58
CHD1-207ENST00000511628 LIN37Q96GY3 246 aaPredicted RBP5.18□□□□□ -1.58
CHD1-207ENST00000511628 MEIS1O00470 390 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 SRFP11831 508 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 HDLBPQ00341 1268 aaKnown RBP5.17□□□□□ -1.58
CHD1-207ENST00000511628 NBPF12Q5TAG4 269 aaPredicted RBP5.17□□□□□ -1.58
CHD1-207ENST00000511628 C9orf131Q5VYM1 1079 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 WAPLQ7Z5K2 1190 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 CCDC144CPQ8IYA2 1237 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 SLC6A18Q96N87 628 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 DIRC2Q96SL1 478 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 ANTXR1Q9H6X2 564 aa5.17□□□□□ -1.58
CHD1-207ENST00000511628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
CHD1-207ENST00000511628 SHISA3A0PJX4 238 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 FITM1A5D6W6 292 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 FKTNO75072 461 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 CHRNEQ04844 493 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 SLC14A2Q15849 920 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 NBPF9Q3BBW0 867 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms