RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 RNPC3Q96LT9 517 aaKnown RBP8.18□□□□□ -1.1
CPNE4-208ENST00000511604 AGAP3Q96P47 875 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 MTRQ99707 1265 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 PHAXQ9H814 394 aaKnown RBP8.18□□□□□ -1.1
CPNE4-208ENST00000511604 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 C2CD2Q9Y426 696 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 STXBP3O00186 592 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 ZNF189O75820 626 aaPredicted RBP8.18□□□□□ -1.1
CPNE4-208ENST00000511604 SASH1O94885 1247 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 CNGA1P29973 690 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 GJA8P48165 433 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 GNAQP50148 359 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 AMPD2Q01433 879 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 CDC37Q16543 378 aaPredicted RBP8.18□□□□□ -1.1
CPNE4-208ENST00000511604 SH2D3CQ8N5H7 860 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 CYFIP2Q96F07 1278 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 ARPC5LQ9BPX5 153 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 FAM167BQ9BTA0 163 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 FAM184BQ9ULE4 1060 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 PHF24Q9UPV7 400 aa8.18□□□□□ -1.1
CPNE4-208ENST00000511604 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 GPR75-ASB3A0A0A6YYF3 556 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 LRRD1A4D1F6 860 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 SRRM3A6NNA2 597 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 INHBCP55103 352 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 DYNC1I2Q13409 638 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 DPY19L2Q6NUT2 758 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 RAD9BQ6WBX8 426 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 AENQ8WTP8 325 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 CDK19Q9BWU1 502 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 SPATA7Q9P0W8 599 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 HDAC6Q9UBN7 1215 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 COL15A1P39059 1388 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ABCA9Q8IUA7 1624 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 E7EVH7 732 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 MAP3K13O43283 966 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 NPTXRO95502 500 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ZKSCAN1P17029 563 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 CYP11B2P19099 503 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 RPL13P26373 211 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ALDH3A1P30838 453 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 MXRA7P84157 204 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 MYL5Q02045 173 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 PPP1R7Q15435 360 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ENOX2Q16206 610 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 LONRF3Q496Y0 759 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 Q4G0T1 1027 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 SPECC1LQ69YQ0 1117 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 EHBP1Q8NDI1 1231 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 MRPS27Q92552 414 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 RUFY1Q96T51 708 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 ZWILCHQ9H900 591 aa8.17□□□□□ -1.1
CPNE4-208ENST00000511604 AATFQ9NY61 560 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
CPNE4-208ENST00000511604 CHD2O14647 1828 aaKnown RBP8.16□□□□□ -1.1
CPNE4-208ENST00000511604 NUTM2FA1L443 756 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 N4BP3O15049 544 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 FOXN1O15353 648 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 BMP6P22004 513 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 NNTQ13423 1086 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 PABPC1LQ4VXU2 614 aaKnown RBP8.16□□□□□ -1.1
CPNE4-208ENST00000511604 FKBP15Q5T1M5 1219 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 EMC10Q5UCC4 262 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 KCTD16Q68DU8 428 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 CCDC129Q6ZRS4 1044 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 FOXP4Q8IVH2 680 aaPredicted RBP8.16□□□□□ -1.1
CPNE4-208ENST00000511604 TEX9Q8N6V9 391 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 AGAP11Q8TF27 550 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 P3H4Q92791 437 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 UNC45AQ9H3U1 944 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 GALNT8Q9NY28 637 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 FRMPD1Q5SYB0 1578 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 AOX1Q06278 1338 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 DLG5Q8TDM6 1919 aa8.16□□□□□ -1.1
CPNE4-208ENST00000511604 SPDYE5A6NIY4 337 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 ATP2C2O75185 946 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 SLC3A2P08195 630 aaKnown RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 UBTFL1P0CB47 393 aaPredicted RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 MDH1P40925 334 aaKnown RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 HSPA2P54652 639 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 PABPC4Q13310 644 aaKnown RBP eCLIP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 PNOCQ13519 176 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 GALNT17Q6IS24 598 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 CHST3Q7LGC8 479 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 CPLX3Q8WVH0 158 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 MAIP1Q8WWC4 291 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 RRP36Q96EU6 259 aaKnown RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 TMOD4Q9NZQ9 345 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 TFR2Q9UP52 801 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 FER1L4A9Z1Z3 1794 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 SH3TC1Q8TE82 1336 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 E2F6O75461 281 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 CAPN15O75808 1086 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms