RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 SH2D4AQ9H788 454 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 MAD2L2Q9UI95 211 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 ZNF112Q9UJU3 913 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 GH2P01242 217 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 EEF2P13639 858 aaKnown RBP13.83□□□□□ -0.2
SGCA-207ENST00000511303 GUCY1A2P33402 732 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 EPHX2P34913 555 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 ICA1Q05084 483 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 SEPT2Q15019 361 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 SULF1Q8IWU6 871 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 C8orf76Q96K31 380 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 ALG1Q9BT22 464 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 ARHGEF10LQ9HCE6 1279 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 GGA3Q9NZ52 723 aa13.83□□□□□ -0.2
SGCA-207ENST00000511303 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 GOLGA6L22H0YM25 854 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 F13A1P00488 732 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 PDHBP11177 359 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 PKP1Q13835 747 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 TRIM29Q14134 588 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 ATL3Q6DD88 541 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 SIAH1Q8IUQ4 282 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
SGCA-207ENST00000511303 PHKBQ93100 1093 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 GMCL1Q96IK5 515 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 SLC26A6Q9BXS9 759 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 ZBTB21Q9ULJ3 1066 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
SGCA-207ENST00000511303 ASTN2O75129 1339 aaPredicted RBP13.82□□□□□ -0.2
SGCA-207ENST00000511303 VPS37CA5D8V6 355 aaPredicted RBP13.81□□□□□ -0.2
SGCA-207ENST00000511303 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
SGCA-207ENST00000511303 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
SGCA-207ENST00000511303 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
SGCA-207ENST00000511303 USP48Q86UV5 1035 aa13.81□□□□□ -0.2
SGCA-207ENST00000511303 TAF1DQ9H5J8 278 aaPredicted RBP13.81□□□□□ -0.2
SGCA-207ENST00000511303 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
SGCA-207ENST00000511303 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
SGCA-207ENST00000511303 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
SGCA-207ENST00000511303 GDF11O95390 407 aa13.8□□□□□ -0.2
SGCA-207ENST00000511303 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
SGCA-207ENST00000511303 BAG4O95429 457 aaKnown RBP13.8□□□□□ -0.2
SGCA-207ENST00000511303 MCM4P33991 863 aa13.8□□□□□ -0.2
SGCA-207ENST00000511303 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
SGCA-207ENST00000511303 GOPCQ9HD26 462 aa13.8□□□□□ -0.2
SGCA-207ENST00000511303 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 USP17L5A8MUK1 530 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 F5H6K3 240 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 PLA2G6O60733 806 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 SLURP2P0DP57 97 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 JAG1P78504 1218 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 ATP2B2Q01814 1243 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 KLRC3Q07444 240 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 NFKBIBQ15653 356 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 PKN1Q16512 942 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
SGCA-207ENST00000511303 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
SGCA-207ENST00000511303 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
SGCA-207ENST00000511303 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 POTECB2RU33 542 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 SCG2P13521 617 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 VEGFAP15692 232 aaPredicted RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 NF2P35240 595 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 SLC1A4P43007 532 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 TRAF1Q13077 416 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 NOL9Q5SY16 702 aaKnown RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 KRT40Q6A162 431 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 CCDC12Q8WUD4 166 aaPredicted RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 KLRG1Q96E93 195 aa13.78□□□□□ -0.2
SGCA-207ENST00000511303 RRP36Q96EU6 259 aaKnown RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
SGCA-207ENST00000511303 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
SGCA-207ENST00000511303 CALML3P27482 149 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 RESTQ13127 1097 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 BTNL9Q6UXG8 535 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 SCYL3Q8IZE3 742 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
SGCA-207ENST00000511303 LPAR1Q92633 364 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms