RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 SRPRBQ9Y5M8 271 aaKnown RBP13.77□□□□□ -0.21
SH3TC2-208ENST00000510779 CPDO75976 1380 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 PRDM1O75626 825 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 TTF1Q15361 905 aaPredicted RBP13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 NTRK3Q16288 839 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 VIPAS39Q9H9C1 493 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 MYO1AQ9UBC5 1043 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 TTC26A0AVF1 554 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 AMPD2Q01433 879 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 DPYDQ12882 1025 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 CCDC181Q5TID7 509 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 OR8K1Q8NGG5 319 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 LY9Q9HBG7 655 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 DUSP10Q9Y6W6 482 aa13.76□□□□□ -0.21
SH3TC2-208ENST00000510779 MYO1FO00160 1098 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 KRT86O43790 486 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 TATP17735 454 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 CXCR5P32302 372 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 PPFIA1Q13136 1202 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 EZH2Q15910 746 aaKnown RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 FAM217BQ9NTX9 383 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 ZNF532Q9HCE3 1301 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 TDO2P48775 406 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 PAK1Q13153 545 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 WTAPQ15007 396 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 CUL4BQ13620 913 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 N4BP2Q86UW6 1770 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 GIMAP7Q8NHV1 300 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 HDAC7Q8WUI4 952 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 CNNM1Q9NRU3 951 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 SMARCAL1Q9NZC9 954 aa13.75□□□□□ -0.21
SH3TC2-208ENST00000510779 HEG1Q9ULI3 1381 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 PPP1R3GB7ZBB8 358 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 H7C1W4 665 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 CASP7P55210 303 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 ATP2B2Q01814 1243 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 PLIN2Q99541 437 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 MYH15Q9Y2K3 1946 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 TRIM49BA6NDI0 452 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 SSBP05455 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 PBX1P40424 430 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 GDAQ9Y2T3 454 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 REXO2Q9Y3B8 237 aaKnown RBP13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
SH3TC2-208ENST00000510779 AGPSO00116 658 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 PDE2AO00408 941 aaPredicted RBP13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 HSF2BPO75031 334 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 MCAMP43121 646 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 IFIT5Q13325 482 aaKnown RBP13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 POTEDQ86YR6 584 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 XBP1P17861 261 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 TCP11X2Q5H9J9 407 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 HELBQ8NG08 1087 aaPredicted RBP13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 IFT81Q8WYA0 676 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 FOXP1Q9H334 677 aaPredicted RBP13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 LAMA4Q16363 1823 aa13.73□□□□□ -0.21
SH3TC2-208ENST00000510779 MINDY4BA8MYZ0 360 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 ZPR1O75312 459 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 DEXIO95424 95 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 IFNAR1P17181 557 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms