RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SYNPO2Q9UMS6 1093 aa13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 HTTP42858 3142 aa13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 ATAD5Q96QE3 1844 aa13.97□□□□□ -0.17
HMGXB3-203ENST00000510472 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 LOC285556D6RIA3 1793 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 PEX10O60683 326 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 CNMDO75829 334 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 PRMT2P55345 433 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 TFAP4Q01664 338 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 KIF22Q14807 665 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 Q3C1V9 767 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 GTF3C2Q8WUA4 911 aaPredicted RBP13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 CEP95Q96GE4 821 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 CCDC136Q96JN2 1154 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
HMGXB3-203ENST00000510472 RAD50Q92878 1312 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 SGSM2O43147 1006 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 FCGRTP55899 365 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 COG2Q14746 738 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 NKX2-3Q8TAU0 364 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 RABGAP1Q9Y3P9 1069 aa13.95□□□□□ -0.18
HMGXB3-203ENST00000510472 F5H6K3 240 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 FMNL1O95466 1100 aaPredicted RBP13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 TSPY3P0CV98 308 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 TSPY8P0CW00 308 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 KLRC3Q07444 240 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 TBC1D10CQ8IV04 446 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 GPRC5AQ8NFJ5 357 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 ARMC5Q96C12 935 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 ADAMTS5Q9UNA0 930 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
HMGXB3-203ENST00000510472 WDR46O15213 610 aaKnown RBP13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 TTLL1O95922 423 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 NEFLP07196 543 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 HOXD10P28358 340 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 DSG3P32926 999 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 HAND2P61296 217 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 ERVK-9P63128 1117 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 ERVK-24P63145 666 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 MLLT1Q03111 559 aaPredicted RBP13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 GMCL1P1Q8NEA9 526 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 GABRQQ9UN88 632 aa13.93□□□□□ -0.18
HMGXB3-203ENST00000510472 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 GREB1LQ9C091 1923 aaPredicted RBP13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 ZNF213O14771 459 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 NMT2O60551 498 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 NDUFB10O96000 172 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 PTH1RQ03431 593 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 PRKCZQ05513 592 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
HMGXB3-203ENST00000510472 TSPY2A6NKD2 308 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 FLT3LGP49771 235 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 NT5C2P49902 561 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 IRF5Q13568 498 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 MAP4K1Q92918 833 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 TANGO6Q9C0B7 1094 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 PORCNQ9H237 461 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 RNF41Q9H4P4 317 aaPredicted RBP13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
HMGXB3-203ENST00000510472 TNPO2O14787 897 aaKnown RBP13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 FLOT1O75955 427 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 MAPK4P31152 587 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 RGS19P49795 217 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 RCSD1Q6JBY9 416 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 USP6NLQ92738 828 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 COA7Q96BR5 231 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 ATG4CQ96DT6 458 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 PAGR1Q9BTK6 254 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 PPP1R9AQ9ULJ8 1098 aa13.9□□□□□ -0.18
HMGXB3-203ENST00000510472 NEDD4P46934 1319 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms