RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 SIAH1Q8IUQ4 282 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 PORCNQ9H237 461 aa12.34□□□□□ -0.43
PFDN1-203ENST00000510217 BIN2Q9UBW5 565 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-203ENST00000510217 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-203ENST00000510217 GJB1P08034 283 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 MAPK4P31152 587 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 GJA8P48165 433 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 GPR142Q7Z601 462 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 CCDC17Q96LX7 622 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
PFDN1-203ENST00000510217 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
PFDN1-203ENST00000510217 FRMPD3Q5JV73 1810 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 HMGCRP04035 888 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 GNAT2P19087 354 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 AAMPQ13685 434 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
PFDN1-203ENST00000510217 TRIB2Q92519 343 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
PFDN1-203ENST00000510217 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 PAK6Q9NQU5 681 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-203ENST00000510217 BTBD7Q9P203 1132 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 TMX2Q9Y320 296 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 MYH4Q9Y623 1939 aa12.32□□□□□ -0.44
PFDN1-203ENST00000510217 EEF2P13639 858 aaKnown RBP12.31□□□□□ -0.44
PFDN1-203ENST00000510217 RASA1P20936 1047 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 TDO2P48775 406 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 PDE1AP54750 535 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 TRIM32Q13049 653 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 LRRFIP1Q32MZ4 808 aaKnown RBP12.31□□□□□ -0.44
PFDN1-203ENST00000510217 MORN1Q5T089 497 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 UBE2Q1Q7Z7E8 422 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 SPICE1Q8N0Z3 855 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 LPAR1Q92633 364 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 USP6NLQ92738 828 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 SH2D4AQ9H788 454 aa12.31□□□□□ -0.44
PFDN1-203ENST00000510217 MINDY4BA8MYZ0 360 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 FOXP2O15409 715 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 CYP2B6P20813 491 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 APBA2Q99767 749 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.44
PFDN1-203ENST00000510217 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-203ENST00000510217 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
PFDN1-203ENST00000510217 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
PFDN1-203ENST00000510217 WDR46O15213 610 aaKnown RBP12.29□□□□□ -0.44
PFDN1-203ENST00000510217 SGPL1O95470 568 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
PFDN1-203ENST00000510217 RGS2P41220 211 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 CCNA1P78396 465 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 COG2Q14746 738 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 CCDC129Q6ZRS4 1044 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 LNPKQ9C0E8 428 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
PFDN1-203ENST00000510217 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 FLOT1O75955 427 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 FARP2O94887 1054 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-203ENST00000510217 IGHDP01880 384 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 APPP05067 770 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-203ENST00000510217 DSG3P32926 999 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 ATP2B2Q01814 1243 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 GRB14Q14449 540 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 CCL14Q16627 93 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
PFDN1-203ENST00000510217 ATG4CQ96DT6 458 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 NAPBQ9H115 298 aa12.28□□□□□ -0.44
PFDN1-203ENST00000510217 SLC15A5A6NIM6 579 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 PRDM1O75626 825 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
PFDN1-203ENST00000510217 PTPREP23469 700 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
PFDN1-203ENST00000510217 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.45
PFDN1-203ENST00000510217 NACAP1Q9BZK3 213 aa12.27□□□□□ -0.45
PFDN1-203ENST00000510217 SPATC1LQ9H0A9 340 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms